Gene Caci_9016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9016 
Symbol 
ID8340410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10426427 
End bp10427206 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content74% 
IMG OID644962107 
ProductZn-dependent hydrolase of the beta-lactamase fold-like protein 
Protein accessionYP_003119670 
Protein GI256398106 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.212694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATC CGCAGACCTT CACGGTCCGC TACCTCGGCG GCCCTTCGGC CCTGCTCGAC 
TACGGCGGCG TCTCGATCCT CGTGGACCCG ACCTTCGACC CGCCCGGCGA CTACCCCATC
GGCCAGCGGG TCCTGACCAA GACCGCCGGC GCCGCCCTGA CCGCCGACGA GGTCGGTGCC
GTGGACGTGG TGCTGCTCTC CCACGACCAG CACCCTGACA ACCTCGACCA CGGCGGCCGC
GACTACGTCG ACACCGCCCG CACCGTCCTG AGCACGCGCT CAGCCGAGGA GCGCCTGGGC
GGCGCGGTGC TGGGCCTGCC GAACTGGGTG AGCCAGGAGT TCGACCGCCC CGGCGGCGGC
ACCGCCCTGG TCACCGGGGT CCCGGCGCTG CACGGCCCGG AGGGCAGCGA GTCCGTGGTC
GGCGAGGTCA CCGGCTTCGT CCTGACCGGC GAGGACCTGC CGACCGTCTA CATCAGCGGC
GACAACGCCT CCCTGGACCG GGTCCGCGAG ATCGCCGCCC GCTACGCCCC GGTCGAGGTG
GCCCTGCTGT TCGCCGGCGG CGCCCGCACC CCGCTGCTGG ACTTCGCCTA CCTGACGCTG
ACCAGCGCCG AGGCCGCCGA AGCCGCCGGG ATCCTGCAGG CCGGCGCCGT GGTCCCGCTG
CACTTCGAGC AGTGGGCGCA CTTCAGCGAG GGCGGCGAGC AACTTCAGCA GGCGTTCGCG
GCGGCGGGCC TGAGCGAGCG GCTGCGGCTG CTCAAGCCGG GCGAGTCGAC GGGGTTCTGA
 
Protein sequence
MANPQTFTVR YLGGPSALLD YGGVSILVDP TFDPPGDYPI GQRVLTKTAG AALTADEVGA 
VDVVLLSHDQ HPDNLDHGGR DYVDTARTVL STRSAEERLG GAVLGLPNWV SQEFDRPGGG
TALVTGVPAL HGPEGSESVV GEVTGFVLTG EDLPTVYISG DNASLDRVRE IAARYAPVEV
ALLFAGGART PLLDFAYLTL TSAEAAEAAG ILQAGAVVPL HFEQWAHFSE GGEQLQQAFA
AAGLSERLRL LKPGESTGF