Gene Caci_9005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9005 
Symbol 
ID8340398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10415012 
End bp10415791 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content66% 
IMG OID644962095 
Producthypothetical protein 
Protein accessionYP_003119659 
Protein GI256398095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC GGCCCACGCG GCTGCTCAGC CGCGCCAACC GCGACCTCGC GAGAGACGGC 
ATCTGGTCCT GGACTATTCC AGCGCTGGCC GCACGACTCC CGGACGGGAC GACATTCCGC
ACATGCAGGG CGGCCGGCGT CTGTTCCCAG GTGTGCTTTG CAAGATCAGG AACGTACAAC
TTCCCGGCCG TGAAGGCCGC GCACGTGAGG AACCTGCTGT TCACCCTCGA AGATCCCGAG
GGATGGGAGC AGGCGATGAC TGCCGAATTG TCCCATCCGA AGTTCGCCGG CGCCCATGTC
CGGATCCATG CGGCAGGCGA TTTCTACTCC GCCGCCTACG CCCGAGCCTG GCTGCGGATC
ATCCGCGCCA CGCCCAACAC CAGCTTCTAC GCGTACACGA AGGAGGTCAT GCTCCATGAC
CGGATACTGG AGCCCGAACG GCCGCCGAAC GCAGTGTGGA TCATCTCCCT CGGAGGGATC
TACGACCGAT ACGTCGATCT GCACAGGCAC CGGGTCTGCG ACGTGTTTCC GACCGAGACG
GAAATCGAGC ACAGCGGATG GCACTCGCAG GCAGAATCTG ATCTCCTCGC CGCCTACGGT
CCGGCACCGG TCGCGATGGC GGCGAACCAG ATCCCTCACC TCCAACGCCG CCAAGGAGAC
CGACGCTTCA GCGAGTGGCA GCGCGAGGTG GACCGAGCCC GCGGCGACAG CACAGACCGG
CCACGCCGAC GCCGCCGCAT CGCCATCGCT CATCCCGTCG GCGCCACCGA CAAACTCTGA
 
Protein sequence
MSERPTRLLS RANRDLARDG IWSWTIPALA ARLPDGTTFR TCRAAGVCSQ VCFARSGTYN 
FPAVKAAHVR NLLFTLEDPE GWEQAMTAEL SHPKFAGAHV RIHAAGDFYS AAYARAWLRI
IRATPNTSFY AYTKEVMLHD RILEPERPPN AVWIISLGGI YDRYVDLHRH RVCDVFPTET
EIEHSGWHSQ AESDLLAAYG PAPVAMAANQ IPHLQRRQGD RRFSEWQREV DRARGDSTDR
PRRRRRIAIA HPVGATDKL