Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_9005 |
Symbol | |
ID | 8340398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10415012 |
End bp | 10415791 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644962095 |
Product | hypothetical protein |
Protein accession | YP_003119659 |
Protein GI | 256398095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGC GGCCCACGCG GCTGCTCAGC CGCGCCAACC GCGACCTCGC GAGAGACGGC ATCTGGTCCT GGACTATTCC AGCGCTGGCC GCACGACTCC CGGACGGGAC GACATTCCGC ACATGCAGGG CGGCCGGCGT CTGTTCCCAG GTGTGCTTTG CAAGATCAGG AACGTACAAC TTCCCGGCCG TGAAGGCCGC GCACGTGAGG AACCTGCTGT TCACCCTCGA AGATCCCGAG GGATGGGAGC AGGCGATGAC TGCCGAATTG TCCCATCCGA AGTTCGCCGG CGCCCATGTC CGGATCCATG CGGCAGGCGA TTTCTACTCC GCCGCCTACG CCCGAGCCTG GCTGCGGATC ATCCGCGCCA CGCCCAACAC CAGCTTCTAC GCGTACACGA AGGAGGTCAT GCTCCATGAC CGGATACTGG AGCCCGAACG GCCGCCGAAC GCAGTGTGGA TCATCTCCCT CGGAGGGATC TACGACCGAT ACGTCGATCT GCACAGGCAC CGGGTCTGCG ACGTGTTTCC GACCGAGACG GAAATCGAGC ACAGCGGATG GCACTCGCAG GCAGAATCTG ATCTCCTCGC CGCCTACGGT CCGGCACCGG TCGCGATGGC GGCGAACCAG ATCCCTCACC TCCAACGCCG CCAAGGAGAC CGACGCTTCA GCGAGTGGCA GCGCGAGGTG GACCGAGCCC GCGGCGACAG CACAGACCGG CCACGCCGAC GCCGCCGCAT CGCCATCGCT CATCCCGTCG GCGCCACCGA CAAACTCTGA
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Protein sequence | MSERPTRLLS RANRDLARDG IWSWTIPALA ARLPDGTTFR TCRAAGVCSQ VCFARSGTYN FPAVKAAHVR NLLFTLEDPE GWEQAMTAEL SHPKFAGAHV RIHAAGDFYS AAYARAWLRI IRATPNTSFY AYTKEVMLHD RILEPERPPN AVWIISLGGI YDRYVDLHRH RVCDVFPTET EIEHSGWHSQ AESDLLAAYG PAPVAMAANQ IPHLQRRQGD RRFSEWQREV DRARGDSTDR PRRRRRIAIA HPVGATDKL
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