Gene Caci_8935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8935 
Symbol 
ID8340328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10347441 
End bp10347980 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID644962025 
Producthypothetical protein 
Protein accessionYP_003119589 
Protein GI256398025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00543582 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.426829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGACC TGAGGCGGCT TCGTCGTGCC TGCGAACGGC GCATAGACGA ACTGCGGATC 
CCACGACCGT TCGACTTGGA CGCGTTCATA GCCAGCGTCC AGAAGCAGCG CGGCGGGCGA
CGGATCCACG TGCGGCCGTC GCCGATCCCG GCCAGCGAGG TTTCGCCCTA TGGCATGTGG
GTCGCCACCC ACGATGCCGA CTTCATCGTC TACGAGCCGG AGACGACGCC CCTTCACCGC
GCGCAGATTG TGCTGCACGA GGTGGGGCAC ATGATCTTCG ATCACCACTC CGACGAGGTG
GTGGACCCTC GGATCCTGCG TGTCCTGTTC CCCGACCTGG ACCCTGCGAT CGTGAAGCTG
ATTCTGAGCC GCCACGACCA CCACAAGCGC GAAGACGAGT TCGAGGCGGA GATGTTCGCC
TCCGTTGTGC TGGAAAGGGC TGGCTACGAG CCAGGCCCGG TCTTGACTGA GGACGGCCTG
ATGGACCGTA TCGGCGATGC ACTCGGGCAT CCGATGCGAC GTCGGGAGCG TGGCATATGA
 
Protein sequence
MRDLRRLRRA CERRIDELRI PRPFDLDAFI ASVQKQRGGR RIHVRPSPIP ASEVSPYGMW 
VATHDADFIV YEPETTPLHR AQIVLHEVGH MIFDHHSDEV VDPRILRVLF PDLDPAIVKL
ILSRHDHHKR EDEFEAEMFA SVVLERAGYE PGPVLTEDGL MDRIGDALGH PMRRRERGI