Gene Caci_8929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8929 
Symbol 
ID8340322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10339806 
End bp10340987 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID644962019 
Producthypothetical protein 
Protein accessionYP_003119583 
Protein GI256398019 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0590592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.157303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGG GCGTGCAGAA GAGATACCGT CGTGTTCTGA CGCTTCGTCG AGACCGAGAG 
CCGCGGCCGT ACCGCCCACG GCCGTTCCCT GCTATCTACG CGGCGCTACT GGTAGCCGGC
GTCATCGGCA CAGCTGGGGT CTACCTGCTG CTGTTGTGGC TGATTCCGGG CGCTAAGGCC
AACCGGCTGG ACGTCGCGAA AACCGCGCTG CTGGTGGTCG GTGGGTCCGG CGCGGTCGCC
GGCCTTTACG TCGCGTATCG GAAGCAGAGA ACCGACGAGG CCAACCACAT ACGTGACCAG
GACAAGCTGT TCACCGAGCG ATACACGCAA GCCATAGCCC AGCTCGGGAA CACGGCCGCC
GCAGTGCGAC TCGGCGGTGT CTACGCTCTC GCCCGAATAG CGGACGACTC AGAACGCGAC
AGGCAGACCT GCATGGAAGT GCTGTGTGCC TACTTGTGCA TTCCGTACGA TCCAAACACC
GCGGACCCGG GTGAAGTAAA GGTTCGTGCA GCAGCCCAGG CCACAGTGTT CGCACGGTTG
CGACCCGACC ACAAGAGCTT CTGGGCCAAC GCCGTAGTTG ACCTCAGCGG CGCCCGCCTT
ACCAATGTCT CACTGCGGCA CGCCAAAACC GCAGGCGCCT ACTTCGTCGA CACCGAGTTT
GACGGGATCT GCGAGTTCGA CCACACAGCG TTTTACGGAG GCGCCATATT TAGGGGCGCG
CACTTCCACC AAGGCAACGA GGTCGACTTC CAGGGCGCTC TGTTCGGCTG GGCCAACTTC
GACGGCGTGA AGTTCGACCG TGCCGTACGG TTCGACGACG TGCAGATCAA CGGCGTCACA
GGGTTCGCCA ACGTCGAGTT CGGAGGCGAC GCATCGTTCA AAAACACTCG ATTTGCCATG
GGCGCGGCGT TCCGCGAATC CCGGTTCGCG GGTTCGGCCA GCTTCAACGG CGCGACCTTT
ACGAAGATCA CACACTTCAC CGATGCTCAC TTCGCGGCGA CCACGTCGTT CGACCACGTG
ACCTTCGGCG AGGCCGTTTG GTTCTACCGA TCGGTCTTCC CCGACCCGCC GCCGTCGTTC
ACCCGCGCCA TGTTCCTCGG CGAGCGCCTG TCAGTGTGGC CCGACGGATT CGCCCCGCCC
GACGCCGCGC GGAACCCGCC GGGCGTGCCC GCAAAGCCGT AA
 
Protein sequence
MSAGVQKRYR RVLTLRRDRE PRPYRPRPFP AIYAALLVAG VIGTAGVYLL LLWLIPGAKA 
NRLDVAKTAL LVVGGSGAVA GLYVAYRKQR TDEANHIRDQ DKLFTERYTQ AIAQLGNTAA
AVRLGGVYAL ARIADDSERD RQTCMEVLCA YLCIPYDPNT ADPGEVKVRA AAQATVFARL
RPDHKSFWAN AVVDLSGARL TNVSLRHAKT AGAYFVDTEF DGICEFDHTA FYGGAIFRGA
HFHQGNEVDF QGALFGWANF DGVKFDRAVR FDDVQINGVT GFANVEFGGD ASFKNTRFAM
GAAFRESRFA GSASFNGATF TKITHFTDAH FAATTSFDHV TFGEAVWFYR SVFPDPPPSF
TRAMFLGERL SVWPDGFAPP DAARNPPGVP AKP