Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8929 |
Symbol | |
ID | 8340322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10339806 |
End bp | 10340987 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644962019 |
Product | hypothetical protein |
Protein accession | YP_003119583 |
Protein GI | 256398019 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0590592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.157303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGG GCGTGCAGAA GAGATACCGT CGTGTTCTGA CGCTTCGTCG AGACCGAGAG CCGCGGCCGT ACCGCCCACG GCCGTTCCCT GCTATCTACG CGGCGCTACT GGTAGCCGGC GTCATCGGCA CAGCTGGGGT CTACCTGCTG CTGTTGTGGC TGATTCCGGG CGCTAAGGCC AACCGGCTGG ACGTCGCGAA AACCGCGCTG CTGGTGGTCG GTGGGTCCGG CGCGGTCGCC GGCCTTTACG TCGCGTATCG GAAGCAGAGA ACCGACGAGG CCAACCACAT ACGTGACCAG GACAAGCTGT TCACCGAGCG ATACACGCAA GCCATAGCCC AGCTCGGGAA CACGGCCGCC GCAGTGCGAC TCGGCGGTGT CTACGCTCTC GCCCGAATAG CGGACGACTC AGAACGCGAC AGGCAGACCT GCATGGAAGT GCTGTGTGCC TACTTGTGCA TTCCGTACGA TCCAAACACC GCGGACCCGG GTGAAGTAAA GGTTCGTGCA GCAGCCCAGG CCACAGTGTT CGCACGGTTG CGACCCGACC ACAAGAGCTT CTGGGCCAAC GCCGTAGTTG ACCTCAGCGG CGCCCGCCTT ACCAATGTCT CACTGCGGCA CGCCAAAACC GCAGGCGCCT ACTTCGTCGA CACCGAGTTT GACGGGATCT GCGAGTTCGA CCACACAGCG TTTTACGGAG GCGCCATATT TAGGGGCGCG CACTTCCACC AAGGCAACGA GGTCGACTTC CAGGGCGCTC TGTTCGGCTG GGCCAACTTC GACGGCGTGA AGTTCGACCG TGCCGTACGG TTCGACGACG TGCAGATCAA CGGCGTCACA GGGTTCGCCA ACGTCGAGTT CGGAGGCGAC GCATCGTTCA AAAACACTCG ATTTGCCATG GGCGCGGCGT TCCGCGAATC CCGGTTCGCG GGTTCGGCCA GCTTCAACGG CGCGACCTTT ACGAAGATCA CACACTTCAC CGATGCTCAC TTCGCGGCGA CCACGTCGTT CGACCACGTG ACCTTCGGCG AGGCCGTTTG GTTCTACCGA TCGGTCTTCC CCGACCCGCC GCCGTCGTTC ACCCGCGCCA TGTTCCTCGG CGAGCGCCTG TCAGTGTGGC CCGACGGATT CGCCCCGCCC GACGCCGCGC GGAACCCGCC GGGCGTGCCC GCAAAGCCGT AA
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Protein sequence | MSAGVQKRYR RVLTLRRDRE PRPYRPRPFP AIYAALLVAG VIGTAGVYLL LLWLIPGAKA NRLDVAKTAL LVVGGSGAVA GLYVAYRKQR TDEANHIRDQ DKLFTERYTQ AIAQLGNTAA AVRLGGVYAL ARIADDSERD RQTCMEVLCA YLCIPYDPNT ADPGEVKVRA AAQATVFARL RPDHKSFWAN AVVDLSGARL TNVSLRHAKT AGAYFVDTEF DGICEFDHTA FYGGAIFRGA HFHQGNEVDF QGALFGWANF DGVKFDRAVR FDDVQINGVT GFANVEFGGD ASFKNTRFAM GAAFRESRFA GSASFNGATF TKITHFTDAH FAATTSFDHV TFGEAVWFYR SVFPDPPPSF TRAMFLGERL SVWPDGFAPP DAARNPPGVP AKP
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