Gene Caci_8909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8909 
Symbol 
ID8340302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10319538 
End bp10320407 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content73% 
IMG OID644961999 
ProductNUDIX hydrolase 
Protein accessionYP_003119563 
Protein GI256397999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.835328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGC AAGGCGGGGA GTACATAGTC CCGGCCGGCA GCCGGCTCAG CGCGCATGTG 
CCGGAGGGCT GGGAGCAGCA GATCGCCGCC TACGAGCGCG GCGAGTTCAC CGCGGTGCCG
CCGAAGCACG CCGCGACAGT GGTGCTGCTG CGCGACCGCG AGGACGGTCC GCCGGACGTC
TACCTCCTCA AGCGCGCCGC CTCGATGTCC TTCGCCGGCG GCTTCTACGC CTTCCCCGGC
GGCCGGGTCG ACCCGCGCGA CGCCGACGCC GAGATCGGGT GGGCCGGACC CTCGGCCGCC
GACTGGGCTC GGCGATTCGG CAGCGACGAG GCCGAGGCTC GGGCGCTGCT GTGCGCGGCG
GTCCGCGAGA CATTCGAGGA GTCCGGCGTC CTGTTCGCCG GACCCGACGA GCACTCCGTG
GTCGCCGACA CCACCGCCGA GGGCTGGGAA GCCGACCGCC GGGCCCTGGT TTCACGGGAA
ACATCACTGG CCGGGTTCCT CGCCAAACGC TCCCTGGTCC TGCGCACCGA CCTGCTCGGC
GGCTGGTCGC GCTGGATCAC CCCGGAGTTC GAGCCGCGGC GGTACGACAC GGCGTTCTTC
GTCGCGGCGC TCCCGGCCGG CCAGCTGACC CGGGACGTGT CGGGGGAGAC CGAGTCGACC
ACCTGGATGC CGCCCCGACA GGCCATTGAC GACCACATCG CCGGGCGGGC CCTGATGCTG
CCGCCGACCG TCACCACGCT GCGCGAGGTG CACTCCTTTA ACACCGCCGC CGAAGCGGTA
CGGGCCGCGG CCACGCGTCC GCTCACGCCG ATCATGGCCA CGGTCCGGCG GCACGACGAC
GGGTCCTGGC ACCTGGAATG GGAACTGTGA
 
Protein sequence
MSQQGGEYIV PAGSRLSAHV PEGWEQQIAA YERGEFTAVP PKHAATVVLL RDREDGPPDV 
YLLKRAASMS FAGGFYAFPG GRVDPRDADA EIGWAGPSAA DWARRFGSDE AEARALLCAA
VRETFEESGV LFAGPDEHSV VADTTAEGWE ADRRALVSRE TSLAGFLAKR SLVLRTDLLG
GWSRWITPEF EPRRYDTAFF VAALPAGQLT RDVSGETEST TWMPPRQAID DHIAGRALML
PPTVTTLREV HSFNTAAEAV RAAATRPLTP IMATVRRHDD GSWHLEWEL