Gene Caci_8879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8879 
Symbol 
ID8340272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10290327 
End bp10291025 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content70% 
IMG OID644961969 
Producthypothetical protein 
Protein accessionYP_003119533 
Protein GI256397969 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACCT ACGTCCTGAT TCACGGAGCG TCCTCAGACT CCTGGCTCTG GCACCGCGTC 
GTCCCGCTGC TGCGTGCGGC GGGGCACGAC GTCGTCGCCC CCGACCTGCC GATCTCCGAC
CCCGCATCAG GGATCCCGGA ATATGCGGAC GCAGTCGTCG CCGCCCTCGG CGACCGTGCC
GCCGCCGACG ACCTCATCGT CGTCGCGCAG TCCTTGGGCA GCTTCACCGG GACCGTGCTG
TCCCAGCGGG TTCCGGCCAA GCTGCTGGTC TTCGTCTCGG GGATGGCACC GAAGGAGGGC
GAGACGCCCG GCGAGTGGTG GGGGGCGACC GGCTACACGG AGGCCAGGCA GGCCAGCGAC
GCGCGCCTCG GACTGCCGGA GGGCGCCGAC CTGAAGGTGG TCTTCTTCCA CGACGTCCCC
AAGGACGTCG TGGAAGAAGC CTTTGAGCGC GGCGAGGTCC AGCAGAGCGA GCGGGCGTTC
GCTCCGCCGC CGATGCCGGC GCTTCCGGCA GACCTTCCCG TGCGCTACGT GGTGGGTCGC
GACGACCGCT TCTTCCCCCT GGACTTCCAG CGCCGGACCA TCCAGGAACG GCTGGGGTTC
GCTCCCGACG AGATGGACGG CGGCCACCTG CTCCCGCTCG CGCGCCCCGA AGAGCTCGTC
GAACGCCTGG AGAACTACCG GGTCGAAGCC GGACTTTAG
 
Protein sequence
MATYVLIHGA SSDSWLWHRV VPLLRAAGHD VVAPDLPISD PASGIPEYAD AVVAALGDRA 
AADDLIVVAQ SLGSFTGTVL SQRVPAKLLV FVSGMAPKEG ETPGEWWGAT GYTEARQASD
ARLGLPEGAD LKVVFFHDVP KDVVEEAFER GEVQQSERAF APPPMPALPA DLPVRYVVGR
DDRFFPLDFQ RRTIQERLGF APDEMDGGHL LPLARPEELV ERLENYRVEA GL