Gene Caci_8785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8785 
Symbol 
ID8340177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10187073 
End bp10187807 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID644961876 
Producthypothetical protein 
Protein accessionYP_003119441 
Protein GI256397877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.841566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA TCGCGCGACG GTTCAACGGT CCCCCGCACT CCGGCAACGG CGGCTACGTC 
TCCGGGATGC TCGCGCAGCT GGTCCTGGAG GAGTTCGGGG AGAGCCCGGG GGCGAAGGTC
GAGGTGACGC TGCGCAAGCC GCCGCCGCTG GAGAAGCCGC TCACCGTGCG GCAGCCGGCG
GAGAGCGAGA GCTTGCAGCT GGTCGACGGC TCGACGGTGG TCGCCGCCGC GGAGCTGGTC
GAGGCCGCCG GGGAACTCGT CGATCTGGTC TCCTATGAGG AAGCAGTCGC AGCAGCCAAG
GGATACGCCG GGTTGAGCGG GCATCCCTTC CTGACCTGCT TCGTCTGCGG GCCGGACCAT
CCGACCGGGC TGCACGTCTT CCCCGGACCG GTGCCGGGAC GCAAGGACGT GGTCGCGGCT
CCCTGGATAC CCGCGCCGGA CACGCTGAGA CCGGAGTTCG TGTGGGCCGC GCTGGACTGC
CCGGGCGGCT GGTCCGCCGG CGACCTGGCC GGACGGCCGA TGGTGCTCGG GCGGATGAGC
GTGGAAATGC TCGACGACGC GCCGCTGATC GCAGGCGAGC CCTACGTGGT GCTGGGGAGG
CACGTGCGGA CCGAGGGACG GAAGACGTTC ACGGTCTCGG CGCTCTACGG CCCTTCGGGG
GAACCGGTGG CGAGCGCCGA AGCGGTGTGG ATCGCGGTCG ACCCGACGAA GGTGAAGCCG
GTCGGCGCCA GCTGA
 
Protein sequence
MLTIARRFNG PPHSGNGGYV SGMLAQLVLE EFGESPGAKV EVTLRKPPPL EKPLTVRQPA 
ESESLQLVDG STVVAAAELV EAAGELVDLV SYEEAVAAAK GYAGLSGHPF LTCFVCGPDH
PTGLHVFPGP VPGRKDVVAA PWIPAPDTLR PEFVWAALDC PGGWSAGDLA GRPMVLGRMS
VEMLDDAPLI AGEPYVVLGR HVRTEGRKTF TVSALYGPSG EPVASAEAVW IAVDPTKVKP
VGAS