| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8717 |
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| Symbol | |
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| ID | 8340108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10107702 |
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| End bp | 10108583 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961807 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119373 |
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| Protein GI | 256397809 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.305327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00522046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTCGACG AGAATTTTCT CGCCGAACGG TTCCAGGAGA ACCGGCCCAG GTTGCGGGCG
GTGGCCTACC GGATGCTGGG CTCGCTGAGC GAGTCCGACG ACGCGCTGCA GGAGGCCTGG
CTGCGAGCCA GCGGCGCCGA CACGGACGAG GTGCGCAACT TCCAGGCGTG GCTGACCACG
ATCGTCGGGC GCGTGTGCCT GAACATGCTG CGTTCGCGGC AGCAGCGCAA GGAGGATTCC
CTAGAGATCC ACATTCCGGA TCCCGTGGTG TGCGCCGAGG ACGACACCAA CCCCGAGACT
GTCGCCCTGA CCGCGGACTC CGTCGGGCTA GCGATGATGA TCGTGCTGGA CACGCTCGCG
CCCGCCGAGC GCTTCGCCTT CGTGCTGCAC GACATGTTCG CGGTCCCGTT CGAGGACATC
GCCGAGGATC TGGAGAAGAC ACCGGCGGCG GTCCGCCAGC TCGCCAGCCG CGCCCGGCGC
CGGGTCGAGG GCCACGCGCC GGTTCCCGAT CCCGACCTCG CGGTACAGCG CACAGCCGTC
GACGCGTTCT TCGCCGCCGC GCGGGACGGT GATTTCGAGG CTCTGGTCGC TGTGCTGCAT
CCGGACGTGG TGCTCCGTGC CGACGGCGGC GTATTGCGGG CCAGCCAGAC GGTGATGCTG
TCCGGCGCGC GGACCGTCGC CTCGCAGGCG CAGCTGGCGC GCACCATGGC TCCGTACGTC
CAGCGCGTCC TCATCAACGG CACGCCTGGT GCGTACGTCG TCAAGGACGG CAAGCCGTTC
TCGCTCATGT CTTTCAATGT CGTCGGCGGC AAGGTCGAGT CGATCCAGGT GATCCTCGAC
CCCGAGCGTC TCGATGCGGT CGCCCTTCAG TTGGCGGCAT AG
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| Protein sequence | MVDENFLAER FQENRPRLRA VAYRMLGSLS ESDDALQEAW LRASGADTDE VRNFQAWLTT
IVGRVCLNML RSRQQRKEDS LEIHIPDPVV CAEDDTNPET VALTADSVGL AMMIVLDTLA
PAERFAFVLH DMFAVPFEDI AEDLEKTPAA VRQLASRARR RVEGHAPVPD PDLAVQRTAV
DAFFAAARDG DFEALVAVLH PDVVLRADGG VLRASQTVML SGARTVASQA QLARTMAPYV
QRVLINGTPG AYVVKDGKPF SLMSFNVVGG KVESIQVILD PERLDAVALQ LAA
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