Gene Caci_8707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8707 
Symbol 
ID8340092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10093144 
End bp10093545 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID644961791 
Productprotein of unknown function DUF307 
Protein accessionYP_003119363 
Protein GI256397799 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.184827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.116207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA TCCTGAACAT CATCTGGCTG GTGCTCTGCG GATTCTGGAT GGCCGTGGGC 
TATGTGGTCG CCGGCATCAT CTGCTGCGTA CTGATCATCA CCATCCCGTG GGGACTGGCG
TCCTTCCGCA TCGCGAACTA CGCGCTGTGG CCTTTCGGCC GGACGATCGT GTCCAAGCCC
ACCGCCGGCG CGATGTCGTT CGTCGGGAAC ATCATCTGGT TCATCGTCGC CGGGCTGTGG
CTGGCGATCG GCCATGCGGT CACCGGTGTG CTGCTCTGCC TGACGATCAT CGGCATCCCG
CTGGGGGTCG CGAACTTCAA GCTGATCCCG GTCTCGCTGG CGCCGCTCGG CAAGGAGATC
GTGACCAGCC GGGAGGCGGA CGCGCGGTTC GGATACCGCT GA
 
Protein sequence
MRFILNIIWL VLCGFWMAVG YVVAGIICCV LIITIPWGLA SFRIANYALW PFGRTIVSKP 
TAGAMSFVGN IIWFIVAGLW LAIGHAVTGV LLCLTIIGIP LGVANFKLIP VSLAPLGKEI
VTSREADARF GYR