Gene Caci_8680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8680 
Symbol 
ID8340062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10066325 
End bp10067824 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID644961761 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_003119336 
Protein GI256397772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.621145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGT CCGCCAGCGT GACCTCGACC CACAACCACG ACCTGGAGCA CGCCGACATC 
CTGGTGCTCT ACGGGATCAC CGGCGACCTC GCGAAGAAGA TGCTGCTCCC GGCGCTGTAC
AAGCTCACCG AGCGCGGCAT GCTCACGGTA CCGGTGGTCG GCGTCGCCTA CTCCGACTTC
GACGACGAGG CGCTGCGCGC GCACGCCCGC CAGTCAGTGA TCGACGCCGG CTACACCATC
GACGAGAAGC TGTTCGCGAA GTTCGCCGCC GACCTGAGCA TTGTCACCGG CGACTTCACC
GACCCGGCGA TCTACGCGAA GATCGGGAAG GCGGTCGCCG GAAAGGGCTT CGCCGCGCAC
TACCTGGCGA TCCCGCCCTC GCTGTTCGAC AAGGTCGCCG CCGGTCTGGC CGAGGCCGGA
CTGAACAAGA ACGCGCGGCT GGTGGTCGAG AAGCCCTTCG GCCACGACCT GGCCTCGGCG
CGGCAGCTCG AGGCGGTGCT GGAGCAGTAC TTCGACCGCG ACCACCTTCT GCGCGTCGAC
CACTTCCTGG GCGACGAGTC GGTCGAGGGC CTGGGCACCT TCCGCTTCGC GAACACCCTG
CTGGCGCCGG TGTGGGACCG CTCCTATATC GACAATGTGC AGATCACCCT GGCCGAGGAC
TTCGACGTCG CCGACCGCGG CTCGTTCTAC GACGCCGTGG GCTGCCTGCG CGACGTGGTC
CAGAACCACC TCTTCCAAGT GATGACCCTG CTGGCGATGG ACCCGCCGAA CGTCGCCGAC
CCGCAGGCGC TGGCGCTGGA GAAGTGGCGG CTGCTGCACT CGGTGCGCAC CATCGACCCG
GCGGACGTCG TGCGCGGGCA GTACGAGGGC TACCTCGACG TGAAGGGCGT GAAGAAGGGC
TCGGAGACCG AGACCTACAT CGCGCTGCGG CTGTGGATCG ACAACTGGCG CTGGGCCGGC
GTCCCGTTCT ACATCCGCAG CGGCAAGGCG CTGGCGGTCA CCGCGACCGA GGTGTGCGTG
CAGCTGCGGC GGCCGCCGTC GGAGCTGTTC CGCGGGCTGG CCGGCGACGT CCCGCCGAAC
CTGATCCGGA TCCGGCTGGA GCCCGGCGCC GGCATCGCCT TCGAGCTGAT GGCGCGCCGG
GGCGAGCGCG GGCAGCTGCC GGTGTCCTTC CCGATGGGCA TCGACTTCGA GAAGGTGCTC
GGCGGCCAGG CCAAGCCGTA CGAGAACATC CTGCACGCGG CGGTCGTCGG CGACTCCAGC
GGCTTCGCGT TCTTCCCGGC GATCGAGGAG AGCTGGCGGA TCGTCGGGAA GATCCTGGAG
AGCGGCAAGC CGACGGTCTA CAAGTCGGGC GGCTGGGGAC CCGACGCGGC GGCGAAGCTG
CCCGGCGGGG ACGGCTGGCA CAACCCGGCC GAGGAGTTGT TCTACGCCAC GCATATCGGG
GAGGCGACGC CGGAGCCGAA GCACAACCCC GAGCCGAAGG ACGCCGCGCA GAAGAAGTAG
 
Protein sequence
MPLSASVTST HNHDLEHADI LVLYGITGDL AKKMLLPALY KLTERGMLTV PVVGVAYSDF 
DDEALRAHAR QSVIDAGYTI DEKLFAKFAA DLSIVTGDFT DPAIYAKIGK AVAGKGFAAH
YLAIPPSLFD KVAAGLAEAG LNKNARLVVE KPFGHDLASA RQLEAVLEQY FDRDHLLRVD
HFLGDESVEG LGTFRFANTL LAPVWDRSYI DNVQITLAED FDVADRGSFY DAVGCLRDVV
QNHLFQVMTL LAMDPPNVAD PQALALEKWR LLHSVRTIDP ADVVRGQYEG YLDVKGVKKG
SETETYIALR LWIDNWRWAG VPFYIRSGKA LAVTATEVCV QLRRPPSELF RGLAGDVPPN
LIRIRLEPGA GIAFELMARR GERGQLPVSF PMGIDFEKVL GGQAKPYENI LHAAVVGDSS
GFAFFPAIEE SWRIVGKILE SGKPTVYKSG GWGPDAAAKL PGGDGWHNPA EELFYATHIG
EATPEPKHNP EPKDAAQKK