| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8568 |
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| Symbol | upp |
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| ID | 8339949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9938232 |
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| End bp | 9938885 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961652 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_003119228 |
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| Protein GI | 256397664 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0766288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0302088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACCG TGTCCATTCA TGTCGTCGAC CACCCGCTTG TCGCCCACAA GCTCACCGTG
CTGCGGGACG CGCGCACCGA CACTCCCACT TTCCGCTCGC TCGCCGACGA GCTGGTGACG
CTCCTGGCCT ACGAGGCCAC CCGCAACGCG CAGGTCGAAC CGACCACGGT GCGCACCCCG
GTCGCCGAGG CCGCCGGGGT CACCTTCAGC GGTCCGCGGC ACCTGGTCGT GCCAGTGTTG
CGCGCCGGCC TGGGCATGCT CGACGGCATG GTCCGGCTGC TGCCGACCGC CGAGGTCGGC
TTCCTGGGCA TGGTCCGCAA CGAGGACACG CTGCAGGCCT CGACCTACGC CACCCGCCTG
CCGGAGCACC TCGTCGGCCG CCAGTGCTAC CTGTTGGACC CGATGCTGGC CACCGGCGGC
ACGCTCATCG CCGCGATCCG CCTGCTCGCC GAGCGCGGCG CCGCCTCGGT GACCGCCGTG
TGCCTGCTCG CCGCGCCCGA GGGTGTCGCC GCCGTGCAGA AGGCGCTGGC GGACCTGGAC
CTGCCCGTGG CGATCGTCAC GGCGGCCATC GACGAGCGAC TCAACGAGAA CGGCTACATC
GTCCCCGGCC TCGGCGACGC CGGAGACCGC CTCTACGGGA CCGTCTCGGC GTAG
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| Protein sequence | MPTVSIHVVD HPLVAHKLTV LRDARTDTPT FRSLADELVT LLAYEATRNA QVEPTTVRTP
VAEAAGVTFS GPRHLVVPVL RAGLGMLDGM VRLLPTAEVG FLGMVRNEDT LQASTYATRL
PEHLVGRQCY LLDPMLATGG TLIAAIRLLA ERGAASVTAV CLLAAPEGVA AVQKALADLD
LPVAIVTAAI DERLNENGYI VPGLGDAGDR LYGTVSA
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