Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8537 |
Symbol | |
ID | 8339917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9909371 |
End bp | 9909766 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644961623 |
Product | DNA mismatch endonuclease Vsr |
Protein accession | YP_003119200 |
Protein GI | 256397636 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00124177 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000481782 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTTTGA ATCGGAGTCG CGATACCCGA CCCGAACTTG CCCTTCGTCG CGCTGTATTC GCCCGTGGAC TGCGCTACCG TGTCGCATAC GAGCCACTCA AGGGGGTCCG GCGTTCGGCC GACATCGCCT TCACCAAGGT GAAGGTCGCG GTCTTCCTCG ACGGCTGCTT CTGGCGCGGC TGCCCCACGC ATTACACCAC GCCTAAGGCG AACGCGGAGT TCTGGGCCAA GAAGGTCAAA GGCAACCAGG CGCGTGACCG GGAGACGGAT GCCCTGTTCG CAGACGCCGG TTGGGTCGTC ATCCGAGTGT GGGAGCATGA AGACGTCATG GAGACCGTCG ATCGCATTAT CGAGACTGTA ACAGAACGTC GGGCTCTCAT GGCCAACAGC TACTGA
|
Protein sequence | MRLNRSRDTR PELALRRAVF ARGLRYRVAY EPLKGVRRSA DIAFTKVKVA VFLDGCFWRG CPTHYTTPKA NAEFWAKKVK GNQARDRETD ALFADAGWVV IRVWEHEDVM ETVDRIIETV TERRALMANS Y
|
| |