Gene Caci_8510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8510 
Symbol 
ID8339890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9869652 
End bp9870512 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content72% 
IMG OID644961597 
Productglycosyl transferase family 2 
Protein accessionYP_003119174 
Protein GI256397610 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0292973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATACT GGGCAATCGT GGTGTCAGTG ATCATCCCCG CGCACAATGA GGCGAGTGTC 
GTCGGTCGTC TGCTCAGCAG GCTGCTCGCC GACGCGGCGC CGGGCGAGTT CGAGGTCTGG
GTCGTCGCCA ACGGCTGCAC GGACGACACG GCGGAGATCG CCGGCGCGTT CGCGGACGTC
AAGGTGCTGA TTGCGCCGGA GGCGAACAAG CACGCCGCCA TGCGCCTCGC CGACGAACAC
GCCGAGGGCT TCCCGCGGCT GTACGTGGAC GCGGACGTCG AGTTCGGGGC GCGGGACGTG
CGCGCGCTCG CGGCGGCGTT CGACGACCCG GGCGTCCTGG CGGCCGGTCC GTCACGCGCG
CTGCCGCCCG AGCGGAGGCC GTGGACCGTG CGGTGGTTCT ACGACGTGTG GGACCAGCTG
CCGGTGGTCC GTGCCGGGCT GTTCGGGCGC GGCGTGGTCG GGGTCTCGCG CGAGGGCTGG
GAGCGGCTGC GCGCGCTGCC GCCTTTGCTC GGCGACGATC TGGCGGCCTC GCTGCTCTTC
GAGCCCGCGC AGCGCCGGGT GGTTTCGGAG TCCACGGTGA TCGTCCACCC GCCGCGGACT
GCGGGGGCGC TTCTCAGGAT CCGTACTCGC GCCCTGGTCT CGACGCTCCA AGCCGCCGAC
GACTCGGAGC TCTCCTCGGC GTCGGATTCG GCGCGGACGT CGCTGTCGGA CCTGCGGGCG
ATCGCCCTGG CCTCGCCGGT GCGCGCCACG CCGAAGGTCG CGTGGTTCCT GGTTCTGACA
GTCGCGACCA AGATACGGGC TCGGCGCGCG GTGCGTGCGA AGGACTTCCG AACCTGGCAC
CGGGACGACA CGAGCCGCTG A
 
Protein sequence
MRYWAIVVSV IIPAHNEASV VGRLLSRLLA DAAPGEFEVW VVANGCTDDT AEIAGAFADV 
KVLIAPEANK HAAMRLADEH AEGFPRLYVD ADVEFGARDV RALAAAFDDP GVLAAGPSRA
LPPERRPWTV RWFYDVWDQL PVVRAGLFGR GVVGVSREGW ERLRALPPLL GDDLAASLLF
EPAQRRVVSE STVIVHPPRT AGALLRIRTR ALVSTLQAAD DSELSSASDS ARTSLSDLRA
IALASPVRAT PKVAWFLVLT VATKIRARRA VRAKDFRTWH RDDTSR