Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8500 |
Symbol | |
ID | 8339880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9859357 |
End bp | 9860487 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961587 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003119164 |
Protein GI | 256397600 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.183777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACA GTGGGCAGGG CGGCGCGGCG GTCCCGCTCA AGGGCAGCCG CGCCCTGGTC ACCGGCGGAG CCGGCACCAT CGGCTCGCAC GTCGTGGACC GGCTGCTGGA CGCCGGCTGC GGGGCGGTGG TCGTGCTGGA CAACTTCGTC CGCGGGCGGC GCGCCAACCT CGCCGCGGCG CTGCCGAGCG GACGCGTGCA GGTCGTGGAG GGGGACATCA GGGACCGCGG ACTGCTCGCC GAGCTGACCG CCGGGACCGA CGTGGTCTTC CACCTCGCGG CGATCCGGAT CACGCAGTGC GCCGAGGAGC CGCGGCTGGC CAACGAGGTG TTGGTCGACG GGACGTTCAA CGTGCTGGAA GCCGCGGCGG CGGCCGGGGT GAAGAAGGTC GTGGCCTCGT CCTCGGCGTC GGTGTACGGC CTGGCCGAGC AGTTCCCGAC CGGCGAGCGG CACCACGCCT ACAACAACGA CACGTTCTAC GGCGCGGCGA AGGCCTTCAA CGAGGCGATG CTCCGCAGCT TCAAGAGCAT GTACGGGCTC GACTATGTGG CGCTGCGGTA CTTCAACGTC TACGGCCCGC GCATGGACAT CCACGGCCTC TACACCGAGG TGCTGATCCG CTGGATGGAG CGCATCGCCG CCGGGACGCC GCCGCTGATC CTCGGCGACG GCACGCAGAC GATGGACTTC GTGCACGTCG CGGACATCGC GCGGGCGAAC GTCCTGGCCG CCGCCTCGGA TCTCACCGAC GAGGTCTTCA ACGTGGCCTG CGGCGTCGAG ACGAGCCTGA ACGACCTGGC GAAGACGCTG TTGGAGGTCA TGGGCTCGGA CCTGCCGGTC GAATACGGCC CGCCGCGCGC GGTCAACGGC GTGACGCGGC GCCTGGCCGA CATCTCGCAG GCCGAGGCGC GGCTGGGGTT CAAGGCCGAG ATGCAACTGC GGGAAGGGCT CGCCGACCTG GTGCAGTGGT GGCGCAGCGA GCAGGAGCCC GCGCCGGCTC CGGCCAAGAA GACGACGGAC GGACTGACCG GTCCGAGCCT GGTGGCGGCG GCAGCGGAGC GCGCCGCCGC GGCAGCCAAG GCGGCACCGG CATCAGCATC GGTATCGGCA TCTGAGGGAG CAGCTTCGTG A
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Protein sequence | MKDSGQGGAA VPLKGSRALV TGGAGTIGSH VVDRLLDAGC GAVVVLDNFV RGRRANLAAA LPSGRVQVVE GDIRDRGLLA ELTAGTDVVF HLAAIRITQC AEEPRLANEV LVDGTFNVLE AAAAAGVKKV VASSSASVYG LAEQFPTGER HHAYNNDTFY GAAKAFNEAM LRSFKSMYGL DYVALRYFNV YGPRMDIHGL YTEVLIRWME RIAAGTPPLI LGDGTQTMDF VHVADIARAN VLAAASDLTD EVFNVACGVE TSLNDLAKTL LEVMGSDLPV EYGPPRAVNG VTRRLADISQ AEARLGFKAE MQLREGLADL VQWWRSEQEP APAPAKKTTD GLTGPSLVAA AAERAAAAAK AAPASASVSA SEGAAS
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