Gene Caci_8380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8380 
Symbol 
ID8339759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9707606 
End bp9708514 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID644961466 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_003119044 
Protein GI256397480 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.892714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGT TGTCCCCGGA CGTCGCCAAA GCCCTGACCG ACGGCGGCCT GGACCCGGAG 
TACGTGGCTT CGGTGATCAT GATGGCCCTG GACGAGGACC TGGCCGACGG TCCGGACGTC
ACCACCGAGG CCACGGTCTC CGCCGACGCA ACCGACACCG CGGACTTCGC CGCCCGCGCG
GTCGGCGTCG CCGCCGGCGT CCCGGTCGCC GCCGCGGTGT TCGATCTCGT GTCGCAGGGC
ACGGCGAAGA TCCGGCAGGC CGTGAAGGAC GGCGACCGGG TCGAGCCCGG GACCGTGCTG
CTCACCGTCA CCGGCGCCAC CCGGGACCTC CTCACCGGGG AACGCACAGC GTTGAACCTC
CTGTGCCACC TCTCCGGGGT CGCTACGCAG ACCCGCCTAT GGGTGGACGC GGTAGAGGGC
ACCGGTACGA AGATCCGTGA CACCCGCAAG ACCACGCCCG GACTGCGCGC CCTGGAGAAG
TACGCGGTGC GGTGCGGCGG CGGCGAGAAC CACCGCATGT CGCTGTCCGA CGCCGGACTG
GTGAAGGACA ACCACGTGGT GGCCGCCGGC GGCGTCGTCG AGGCCTTCGA GGCGGTGCGC
AAGGCGCATC CCGGACTGCC GATCGAGGTC GAGATTGACT CGCTGGAGCA GCTGCCCGGG
GTGCTCGCGG CCGGCGCCGA GCTGATCCTG CTGGACAACT TCACGCCGGA GCGCATGCGA
GCGGCGGTCC AGGTGACCGG ACGCAATGAG CTGTACGGAC GGACCCGGCT GGAGGCGTCC
GGCGGACTGA CGCTGGACCT GGCGCGCGCC GTCGCCGAGA CCGGTGTGGA CTACATCTCC
GTCGGGGCGC TGACGCACTC GGCGCCGATC CTGGACGTCG GCTCGGACTT CCGCGAAGAA
GGGAAGTAG
 
Protein sequence
MSSLSPDVAK ALTDGGLDPE YVASVIMMAL DEDLADGPDV TTEATVSADA TDTADFAARA 
VGVAAGVPVA AAVFDLVSQG TAKIRQAVKD GDRVEPGTVL LTVTGATRDL LTGERTALNL
LCHLSGVATQ TRLWVDAVEG TGTKIRDTRK TTPGLRALEK YAVRCGGGEN HRMSLSDAGL
VKDNHVVAAG GVVEAFEAVR KAHPGLPIEV EIDSLEQLPG VLAAGAELIL LDNFTPERMR
AAVQVTGRNE LYGRTRLEAS GGLTLDLARA VAETGVDYIS VGALTHSAPI LDVGSDFREE
GK