| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8325 |
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| Symbol | |
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| ID | 8339704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9650954 |
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| End bp | 9651907 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644961411 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003118989 |
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| Protein GI | 256397425 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.883441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGA GTCCGGCCGA CGAAGGCTCG CCCGCGCCAG GCCCTGAGCG GGCCCTGAGG
CTGGGCACCC GGGCCAGCAC CCTGGCCCTG GCGCAGTCCG GGATGGTCGC CGAGGCGTTG
ACCGCGGCCA CCGGGCGGGC TGTGGAGCTG GTCCACGTGA CCACGTACGG CGACACCTCG
CGCGAGGCGC TGTCCGTCAT CGGCGGGACC GGCGTGTTCG TCAACGCTCT GCGAGAGGCG
ATCTACGCCG GCGACGTCGA CTTCGCGGTG CACTCGCTGA AGGACCTGCC GACCGCGGCG
CCCGAGGGGC TGCACCTGGC GGCGATCACC GAGCGCGCGG CCGTGAACGA CGCGCTGGTG
GCCCGGGACG GCCTGAAACT GGCCGACCTG CCGGCCGGGG CGAAGGTCGG GACCGGCGCG
GCGCGGCGGA TGGCGCTGCT GAAGATGATC CGCCCGGATC TGGAGATCGT GCCGATCCGC
GGCAACGTCG ACACCCGCGT GAACCACGTG CGCTCCGGCG ATCTGGACGC GGTCGTGGTG
GCGCTGGCCG GACTGCAGCG CCTCGGCCGT GCCGAGGAGG CCACGGAGGT CTTCGGACCC
GATGTGATCC TGCCCTCGCC GGGACAGGGC GCGCTGGCCG TGGAGTGCAA GGACCCGGAG
CTCGCCGAGC TGCTCGCGGT GCTGGATTCC CCGCTCACCC GGGCCGCGGT GGTCGCCGAG
CGCACGATGC TGGCGGTGCT GGAGGCCGGG TGTTCGGCTC CGGTGGGTGG CCACGCGATC
GCCTTGGATG ACAACGTTTT GTCGTTGACC GGGGTGGTTG CTACCGTCAG CGGGTCCCGC
GGCCTGCGGC TTTCCCACGC GGGCGCGGTC TCCGAGCCCG AGGCTCTGGG ACGGCGGGTG
GCCCAGGCGC TGCTCGCCGA CGGCGCCGCC GAGCTGATGG AGGCCGGCGC GTGA
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| Protein sequence | MSGSPADEGS PAPGPERALR LGTRASTLAL AQSGMVAEAL TAATGRAVEL VHVTTYGDTS
REALSVIGGT GVFVNALREA IYAGDVDFAV HSLKDLPTAA PEGLHLAAIT ERAAVNDALV
ARDGLKLADL PAGAKVGTGA ARRMALLKMI RPDLEIVPIR GNVDTRVNHV RSGDLDAVVV
ALAGLQRLGR AEEATEVFGP DVILPSPGQG ALAVECKDPE LAELLAVLDS PLTRAAVVAE
RTMLAVLEAG CSAPVGGHAI ALDDNVLSLT GVVATVSGSR GLRLSHAGAV SEPEALGRRV
AQALLADGAA ELMEAGA
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