| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8273 |
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| Symbol | ispH |
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| ID | 8339652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9583672 |
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| End bp | 9584655 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961359 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003118937 |
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| Protein GI | 256397373 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAACCA TGAACGCCTC TGCACCTGAA GACCGCCGCG TCCTCCTCGC CGCACCCCGC
GGTTACTGCG CCGGCGTGGA CCGCGCGGTC GTGACCGTGG AGAAGGCGTT GGAGCTCTAT
GGGGCGCCCG TGTACGTCCG CAAGGAGATC GTGCACAACA AGCACGTCGT GCAGACGCTG
CAGAACCGCG GCGCGGTCTT CGTGGAGGAG ACCGACGAGG TGCCCGAGGG CGCGACCGTG
GTGTTCTCCG CGCACGGCGT GGCGCCGATC GTGCACGAGG AGGCGTCCCG GCGCCGCCTG
AAGACCATCG ACGCCACCTG CCCGCTGGTC ACGAAGGTGC ACAAGGAGGC CGTGCGCTTC
GCCGAGCAGG ACTACGACAT CCTGCTCATC GGCCACGACG GCCACGAGGA GGTCGTCGGC
ACCACCGGCG AGGCGCCGGA GCACATCGTG CTGGTCGACG GCCCGGACTC GGTCGCCGAC
GTGCAGGTGC GCGACCCCGC GAAGGTGGCG TGGCTGTCGC AGACCACCCT GTCGGTGGAC
GAGACGACCG CGACCGTGGA CCGGCTGCGC GAGAAGTTCC CGCTGCTCCT GGACCCGCCG
TCCGACGACA TCTGCTACGC CACCCAGAAC CGGCAGATCG CGGTCAAGCG CATCGCGGCC
GACTCGGACC TGGTGATCGT GGTCGGCTCG AAGAACTCCT CGAACTCGGT GCGCCTGGTC
GAGGTCGCGC TGGAGGCCGG CGCGGGCGCC GCGTACCTCG TCGACTTCGC CTCGGAGATC
AGCGAGGACT GGCTGGAGGG CGTCCGCACG GTCGGGCTGA CCTCTGGCGC CTCGGTCCCG
GAGGACCTGG TGGACGGCGT GCTGTCGTGG CTCGCCGAGC GCGGGTACGG GACGGTCGAG
GTCGTACGGT CGGCGGAGGA GAAGCTGCTG TTCGCGCTGC CGCCGGAGCT ACGGAAGGAC
ATGCGCGAGG GCAGCGAGGC GTAG
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| Protein sequence | MGTMNASAPE DRRVLLAAPR GYCAGVDRAV VTVEKALELY GAPVYVRKEI VHNKHVVQTL
QNRGAVFVEE TDEVPEGATV VFSAHGVAPI VHEEASRRRL KTIDATCPLV TKVHKEAVRF
AEQDYDILLI GHDGHEEVVG TTGEAPEHIV LVDGPDSVAD VQVRDPAKVA WLSQTTLSVD
ETTATVDRLR EKFPLLLDPP SDDICYATQN RQIAVKRIAA DSDLVIVVGS KNSSNSVRLV
EVALEAGAGA AYLVDFASEI SEDWLEGVRT VGLTSGASVP EDLVDGVLSW LAERGYGTVE
VVRSAEEKLL FALPPELRKD MREGSEA
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