Gene Caci_8264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8264 
Symbol 
ID8339643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9575086 
End bp9575880 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID644961350 
Producthypothetical protein 
Protein accessionYP_003118928 
Protein GI256397364 
COG category[R] General function prediction only 
COG ID[COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.403554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0995944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAT CACGCCGAAA GTTCGACATC GACGAGTTCG TCCGCGAGTG CCTGCAGGCC 
TGGGAGGCCG ACGGGGCAGG AGCGGTGAAG GACGTGCTGG ACCGGACACT CGGGCGCGGA
TGCGCGCCGG TGCGCGAGTG CTTCGGGGAC CCGCGCGAGG CCCACTTGCA AGTGCTGTAT
CCGGGCCCTG AGCTGGTCAT CGAGAACATG GTCTGGGCGC CGGGGATGTC CTACCCCGCG
CACAACCACA ACACGCCGGT CATGACGGGC GTCTACGCCG GGCTGGAGGT CAACGACTTC
TACCACCAGA CCCGGACCCG CAAGGGCGGA CGCTTACAAC GGACGGCGAC GGTCGACATC
AACGAGGGCC AGGCAGTGCT GATGGCGCAC GACGCCATCC ACCGGATAGC CAATCCCAAC
AGGCGCACCT TCACCGGCGC GTTCCACATA TACATGGGCG ACTATCTGCA CTCCTCCCGC
TCCATCTGGT ATCCCGACGA AGCCGCCGAG ACACCGGCCA CCTTCGCGGT GACGAAGGAC
ATCTTCGCCG CCGCGAACCG CGACCTGGCC GCCGCCCGCG CGGCCGACGC GGAGCAGGAG
CTCCACAAGA AGAAGGCGGC GGCCGGCACC GGCGTCCTGG GCGGTTCCAC CGGCCCGGGC
TCGGCCTCCG GACCGCCGTC CGGACCGTCG GCGAGCCACC CGCACGCCGC GACGCATTCC
GCGCCGCACG CGCCGGCCCG GGGACCGTCG CGGCGGGGCA GCAGACCGCC GCTTCATCTG
CCGGGCGATC AGTGA
 
Protein sequence
MPRSRRKFDI DEFVRECLQA WEADGAGAVK DVLDRTLGRG CAPVRECFGD PREAHLQVLY 
PGPELVIENM VWAPGMSYPA HNHNTPVMTG VYAGLEVNDF YHQTRTRKGG RLQRTATVDI
NEGQAVLMAH DAIHRIANPN RRTFTGAFHI YMGDYLHSSR SIWYPDEAAE TPATFAVTKD
IFAAANRDLA AARAADAEQE LHKKKAAAGT GVLGGSTGPG SASGPPSGPS ASHPHAATHS
APHAPARGPS RRGSRPPLHL PGDQ