| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8236 |
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| Symbol | |
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| ID | 8339615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9547530 |
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| End bp | 9548915 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644961322 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003118900 |
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| Protein GI | 256397336 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGA CGACCAAGAC CGTCGCGACC GCCAAGACCG CCGAGACCCT CGAGACCGTC
GAAGCGGTCT GGCGGATGGA GGCGGCCCGC GTGGTGGCCA CCCTGGCCCG TTACACCGGC
GATCTGGGCT TGGCCGAGGA ACTGGCCCAG GACGCGCTGG TCGCGGCGCT GGAGCAGTGG
CCGGCCGAAG GGGTGCCGGC CCGGCCCGGC GCCTGGCTGA CCGCGGTCGG CAAGCGGCGC
GCCGTGGACC ACTTCCGGCG CGCCGAGACG CTGCGCCGCA AGGTCGGCGA GCTGGGCCGC
GAGCTGGAGG CCGGCGGCGC GCCGGCCGAG ACCGACCCGG CCCTGGACGC CGTGGACGAG
GCGCTGTCCG ACACCGCCGT CGACGACGAC CTGCTGCGCC TGGTCTTCAC CGCCTGCCAT
CCGGTGCTGT CCGCCGAGGC CCGCGTCGCG CTCACGCTGC GCGTCCTCGG CGGGCTGACC
ACCGCCGAGA TCGCCCGCGC GTTCCTGGTC CCGGAAGCCA CGGCCGCGCA GCGGATCGTG
CGGGCCAAGC GCGCGCTCGC CGACGCCGGA GTCCCGTTCG AGGTCGCCGA CGGTCCCGAG
CGGCGGCGGC GCCTGGCCTC AGTGCTGGAG GTCGTGTACC TGATCTTCAA CGAGGGCTAC
TCGGCGACCG CCGGCGACGA CTGGCTGCGC GCCGACCTCT GCGAGGAGGC GCTGCGGCTG
GGCCGCGTAC TGACCGCGCT GATGCCAGCC GAGTCGGAGG TGCACGCGCT GCTGGCGCTG
ATGGAGATCC AGGACTCGCG GCGGCACGCG CGGACCGGAC CCGACGGGGA GCCGGTGCTG
CTACTGGACC AGGACCGTGC GAAGTGGGAC CGGTCGCAGA TCGAGCGGGG TCTGGCAGCC
CTGGTGCGTG CCGACCAGGC GTTCGCGGCA GAGCTCGAGG CAGCGGCAGC AGCAGCCGCA
GCGGCGACGC AAAGCTCTGA CACCCCCCAG CCGGGCACGT ATCACCTCCA AGCCGCCCTC
GCCGCATGCC ATGCCCGCGC CCGCACCGCC GACGACACCG ACTGGCGCCT CATCGCCGAC
CTCTACGACC GGCTCGTGCG GCAGACCCGC TCCCCGGTCG TCGAGCTCAA CCGCGCCGTC
GCGGTCGGCA TGGCCGAGGG CCCGGCCGCC GGTCTGGCGA TCACGGACGC GCTCACCGGC
CTGCGCGCGA TGCAGGGCTA CCACCTGCTC CCCAGCGTGC GCGGCGACCT GCTGGTCCGG
CTCGGCCGCC CTGCCGAAGC CCGCGCCGAG TTCGAGCGCG CCGCCGGACT CACCGCGAAC
ACCCGGGAAC GCGCGCTGCT GCTGGCGCGC GCCGCGGCGT GCGAAGCCGA CGTCTCCGAG
GCCTGA
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| Protein sequence | MAQTTKTVAT AKTAETLETV EAVWRMEAAR VVATLARYTG DLGLAEELAQ DALVAALEQW
PAEGVPARPG AWLTAVGKRR AVDHFRRAET LRRKVGELGR ELEAGGAPAE TDPALDAVDE
ALSDTAVDDD LLRLVFTACH PVLSAEARVA LTLRVLGGLT TAEIARAFLV PEATAAQRIV
RAKRALADAG VPFEVADGPE RRRRLASVLE VVYLIFNEGY SATAGDDWLR ADLCEEALRL
GRVLTALMPA ESEVHALLAL MEIQDSRRHA RTGPDGEPVL LLDQDRAKWD RSQIERGLAA
LVRADQAFAA ELEAAAAAAA AATQSSDTPQ PGTYHLQAAL AACHARARTA DDTDWRLIAD
LYDRLVRQTR SPVVELNRAV AVGMAEGPAA GLAITDALTG LRAMQGYHLL PSVRGDLLVR
LGRPAEARAE FERAAGLTAN TRERALLLAR AAACEADVSE A
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