Gene Caci_8158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8158 
Symbol 
ID8339537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9461220 
End bp9462068 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID644961244 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003118822 
Protein GI256397258 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT TCACCTCTTA CGACGGCACC GATCTGTCCT ACCGCGAGGA GGGCGCCGGC 
GACCCGCTGG TCTGCCTGCC CGGCGGTCCG CTTCTGTCCT CGACCTACTT CTTGGACCTC
GGCGGTCTGC CCGCGTCACG GCGCCTGATC ATGCTCGAAC ACCGCGGTAC CGGCGCGTCG
GCTGTACCGC AGGATCCTGA GACGTACCGC ATCGACCGCA TGGTCGCCGA CGTCGAAGCC
CTGCGCGTGC ACCTCGGCCT CGAGCAGCTG GACCTCCTCG CGCACTCCGC CGGCGCCAAC
CTCGCGATGC TCTACGCCAC CGCGCACCCG GACCGGGTCA GCCGCCTGAC ACTGATCACG
CCGGGCACCC GCGCGGTCGG CTTCGCGCCG ACGCCGGAGG CCGTCCGCGA AGAACTCCTC
ACCCGCGTCG GCGAACCCTG GTACCCGGCC GCGTGGGAAG CCCTCCAGCG CATCGAAGCC
GACGAGGAAT CCGACGAAGA CTGGGACGCG ATCACCCCCA CCTACTACGG CGCCTGGACC
CCCGCCGCCC AAGCCCACGC GGCACTCCTC CTCGAGAGCG ACGAGGAGAA GCAGGACCTG
CACTTCGCCA AGGGCGCCTT CGACCCGGAA GCCACCATCG CCGCACTGGC CACCCTCGAC
CTCCCGATCC TGATCCTCGC CGGCGCCCGC GACCCGGGCC CGACCCCGGA CCGCGCCCGG
GAGCTGGCGG ACTTGTTCCC CAAGGCGCAG GTCCGCTTCG AGATACAGGC GGGCGCCGGC
CACTTCCCCT GGGTCGACGA CCCGGCGGCG TTCGGCGCGG TGGTGACGGA CTGGCTGGCG
GAGAAGTAG
 
Protein sequence
MATFTSYDGT DLSYREEGAG DPLVCLPGGP LLSSTYFLDL GGLPASRRLI MLEHRGTGAS 
AVPQDPETYR IDRMVADVEA LRVHLGLEQL DLLAHSAGAN LAMLYATAHP DRVSRLTLIT
PGTRAVGFAP TPEAVREELL TRVGEPWYPA AWEALQRIEA DEESDEDWDA ITPTYYGAWT
PAAQAHAALL LESDEEKQDL HFAKGAFDPE ATIAALATLD LPILILAGAR DPGPTPDRAR
ELADLFPKAQ VRFEIQAGAG HFPWVDDPAA FGAVVTDWLA EK