| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8146 |
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| Symbol | ispD |
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| ID | 8339525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9446276 |
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| End bp | 9447037 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644961232 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003118810 |
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| Protein GI | 256397246 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCG TCGTGAGCAT GAGTACTGAT CCCGCCCCCG AGACCGGCTC CGGAACGCCG
GCCGGCGCCG CCGCGCCCGG CCGCGTCGCC GTGATCGTCC CGGCCGCCGG CAAGGGCGAG
CGGCTGGGCC CGGGCGCCCC GAAGGCGCTG CGCGAGCTCG GCGGCCTGCC GCTGCTGGTG
CACGCGGTCC GCACCCTGGT CGCCGCCCGC TCGGTGGACC TGGTCGTGGT CGCCGCCCCG
CCGGACCCCC AAGGCGTCGC CGAGGTGCAG CGGCTGCTGG CCGATCTGCC CGGCGACACC
CGCGTGGTGG CCGGGGGGAC GAGCCGGCAG GAGTCGGTCG CGCTGGCGCT GGCGGCGCTG
CCGGCGGACT GCGACGTGGT GCTGGTCCAC GACGCCGCCC GCGCGCTGAC CCCGGTCGAG
GTGATCGGCG CGGTCGTCGC CGCGGTGCGC GGCGGAGCCG GGGCGGTGAT CCCGGTGCTG
CCGGTCACCG ACACCGTCAA GGCCGTGGAC GGCGACCTGG TGACCGCGAC CGTGGACCGC
TCGACGCTGC GCGCCGTGCA AACCCCGCAG GGTTTCACCC GGGACATCCT CGCCAAGGCG
CACGCGGCCG CCGACCCGGC CGCGCCGGCC ACGGACGACG CCGGACTGGT CGAAGCACTC
GGACTCCCGG TGCGCACCGT CCCCGGACAC GCCGAGGCCT TCAAGATCAC CACGCCCTTC
GACCTCGTCC TGGCCGAGGC CGTCCTCAGG AGGCGCCGAT GA
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| Protein sequence | MSGVVSMSTD PAPETGSGTP AGAAAPGRVA VIVPAAGKGE RLGPGAPKAL RELGGLPLLV
HAVRTLVAAR SVDLVVVAAP PDPQGVAEVQ RLLADLPGDT RVVAGGTSRQ ESVALALAAL
PADCDVVLVH DAARALTPVE VIGAVVAAVR GGAGAVIPVL PVTDTVKAVD GDLVTATVDR
STLRAVQTPQ GFTRDILAKA HAAADPAAPA TDDAGLVEAL GLPVRTVPGH AEAFKITTPF
DLVLAEAVLR RRR
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