Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8140 |
Symbol | |
ID | 8339519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9437727 |
End bp | 9438455 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961226 |
Product | ribonuclease H |
Protein accession | YP_003118804 |
Protein GI | 256397240 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGTA GCCAGAAGCG TCTCATCGCC GCCTGTGACG GCGCCACCAA AGGTAATCCC GGTCCGTCGG CGTGGGCCTG GGTTCTGGCT GACGCGGATG GGAAGGTTCT GCGCTGGCGT TCGGGTCCGT TGGGGCATGC GACCAACAAC ATCGCTGAGC TGACCGCGCT GCGGGAGCTG CTGGTGGAGG TTGGTCCGGG CGCGCAGGTC GAAGCTCGGC TGGATTCGCA GTACACGATC AACGCTGTGA CCAAGTGGCT TCCCTCGTGG AAGAAGAACG GGTGGCTGAC CGCGAGCAAG AAGCCGGTGG CCAATGCCGA CCTGATCCGC GAGATCGATG CCCTGCTGGC CACCCGCGAC GTCGCTTTCG TCCATGTCGC GGCGCACCAG GTCAACGGCG ATCCCTACAA CGACCTCGCC GACCGCGCCG CGAGTGCCAG CGCGATCAGT CAGCAGGCGC TGGAGGGCAC GGACGCCGCG CAGGTTCCGG GGACGCCGGA CCGGCCCGCC GGGAGCGGAC GCTCCGGTGG TGGCCGTTCC GGTGGTAGCA GCGCTGCGGG CAGCTCCGGT GGCGGCAGCA AGAGCAACGG CACCGACACC AAGCCGAAGA AAGCCTTCAC CATCCAGGCG AAGTTCGCGG GCACCTGCTC CTGCGGCAAG GGTTACGACG CCGGCGAGAA GATCACGAAG CTCGACTCCG GGAAATGGGG GCATCCGGCC TGCGCGTGA
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Protein sequence | MPSSQKRLIA ACDGATKGNP GPSAWAWVLA DADGKVLRWR SGPLGHATNN IAELTALREL LVEVGPGAQV EARLDSQYTI NAVTKWLPSW KKNGWLTASK KPVANADLIR EIDALLATRD VAFVHVAAHQ VNGDPYNDLA DRAASASAIS QQALEGTDAA QVPGTPDRPA GSGRSGGGRS GGSSAAGSSG GGSKSNGTDT KPKKAFTIQA KFAGTCSCGK GYDAGEKITK LDSGKWGHPA CA
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