Gene Caci_7983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7983 
Symbol 
ID8339361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9261075 
End bp9262667 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content74% 
IMG OID644961068 
Producthypothetical protein 
Protein accessionYP_003118647 
Protein GI256397083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG AGACCGATCC CCGCAGCGCC GTCGACGCCG GGCCGGACCG CAGCTGGGTG 
GCCGAGCAGC TGGCGGCGGC GCGGGCACGG CAGGAGCCGG ACGGGGAACC GTCGGCTCCG
GCGCTCGGGG AGGCGCTGCG CGAGCTGGCC GCCGACTGGG GCGAGGCGCT GGTGGTCGCG
TGGAACGGAC CCCATGGCCG GGACCTGCGC CTGGCGGTGC GGGCCGCGAC GCACGCCGCC
CTGGCCGCCG TCGCGAGCTG GCTGGCCGCC GTCACCCTCT GCGTGACCGT CTGGCTGGTC
TCCGCCCCCG ACACCGCGGG CATCGTCAGC CCGCTGCGGG TCGGCGGCCA GCTCTGGCTG
CTCGGCCACC ACGCCGCGCT GGACGTCCCG GCCGGCCGCA TCGCGCTGGC GCCGCTTGGC
TTCACCGCGC TGTTGGTGCT CGCGCTGTGG CAGACGACTG TCGCGCCTAT CGCTAGACCG
GCGCAGATCG CTTACACCGC CTTCGGCGCC GCGACCGGCT ACTGCCTGGT GGCCGCGCTC
GTGGCGGCCG CGGCGGCGAC CAGCGACGTG CGGCCGGATA CCGCGCAGGC GGTGTTGTTC
GCGGTGCTGT TCGGCGGACT CGTGCCGACG GCGGCGCGCT GGCGGCGGAT CGCCGGGTTC
TGCGACGCGC CGGCCTGGGT TGGTACAGCC GCGCGGGCGG CGACGGCAGC CGGCGCGGTG
CTGGTCGCCG GGGGAGCGGC CACGCTGGCC GCCACCCTCG TCGCCCACCT GCCGGAAAGC
GGCTGGCCGC GCGGGATCGC CGACGCCGCC GGCATGTTCC TGCTCAGCCT CGCCGTGCTG
CCGAACGCGG CCGCCTGGAC GATGGCGTAC GTGCTCGGAC CGGGGTTCGC GGTCGGCACG
GGAACCGGTG TCAGCGTGCT GAGCGCGAAG ATCGGCGCGC TGCCGGTGTT CCCGATGCTC
GGCGCACTGC CGCGCGACGG CAGCCGGACC TTGCCCTACG ACCTGGCGTT CCTCGCGGTA
CCGGTGGCGG CCGGAGTGGT GCTCGCGCTG GTCGTGATGC GCGGCATTCG AGGGTCCCTC
GGCAACCGGA TGCGCGCGCT CGGCGCGGCG TCGGTGGTCG TCGCGCTGTT CGCCGGACTA
GCCGCGACAC TGTCCGGCGG ACCGTTGGCC GGCGGACGGA TGGCGACGCT GGGACCCTCC
GGCTGGCGCA CGGCGGTGGC CGCGCTCGTT CTGCTGGGGG TGAGCGCAGG CGTTGTAGTG
CTGACGCCGC CATCGGTCGT GGCTGTCAGA GGGCTGTCTT TGAGGCGCGC GCTGGACGCC
GTGGCTGAAC GCCTGCCCCG GCGCCGGGTC GAAACAGGAC CCGAAATCAC GCTTCCGGTG
TTCGAGCCGC TTCCGGAAGT CCAGGCCGAA GAAGCCGAAG AAGCCGAAGA AGCCGAAGAA
GCCGAGGAGC CTCAGGAACT CGGCGATGAA GCCGATCTGC CCGAGCCCGA ATCTGAGCCC
GATGACCCTG CTGACCAGGT CGAGGAAGAG CCAGCCGAGG CCGAGCAGCC TGAAGAACAG
CAAACCGATC TGTCCGAGCC CCAGCCCGAA TAA
 
Protein sequence
MRDETDPRSA VDAGPDRSWV AEQLAAARAR QEPDGEPSAP ALGEALRELA ADWGEALVVA 
WNGPHGRDLR LAVRAATHAA LAAVASWLAA VTLCVTVWLV SAPDTAGIVS PLRVGGQLWL
LGHHAALDVP AGRIALAPLG FTALLVLALW QTTVAPIARP AQIAYTAFGA ATGYCLVAAL
VAAAAATSDV RPDTAQAVLF AVLFGGLVPT AARWRRIAGF CDAPAWVGTA ARAATAAGAV
LVAGGAATLA ATLVAHLPES GWPRGIADAA GMFLLSLAVL PNAAAWTMAY VLGPGFAVGT
GTGVSVLSAK IGALPVFPML GALPRDGSRT LPYDLAFLAV PVAAGVVLAL VVMRGIRGSL
GNRMRALGAA SVVVALFAGL AATLSGGPLA GGRMATLGPS GWRTAVAALV LLGVSAGVVV
LTPPSVVAVR GLSLRRALDA VAERLPRRRV ETGPEITLPV FEPLPEVQAE EAEEAEEAEE
AEEPQELGDE ADLPEPESEP DDPADQVEEE PAEAEQPEEQ QTDLSEPQPE