Gene Caci_7953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7953 
Symbol 
ID8339331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9225404 
End bp9226141 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content78% 
IMG OID644961038 
Producthypothetical protein 
Protein accessionYP_003118617 
Protein GI256397053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TGAGCACCAC GGTCCGGCGC GGCCTGGTCG TCACGGCGGC CGCGATGGCC 
GCCGGTCCCG TCGTCGGCGG CGTCGCCTCC GCGGCGACCG CACCGACGAC CAGCGTCCCG
CTGGACACCG CGCCGATCTC GACCACCGCC GCCACCCCCG CGCTGCAGGC CGTCGCGCCG
CTGCCGGTGA CCCGCTCAGC CCTGCCGATC GGCGGGCTCG ACTCGGTCAT GCCGATCTCC
GGCGGCCTGG CCAACGGCCT CCCGGTCAAC GGCCTCACCG GCGGCCTCCC GCTGAACAAC
ATCGCCGGCG GCCTGCCGGT GAGCGGCCTG GCCGGCCAGC TGCCGGTGGT CGGGCCGATG
GCCCAGAACC TGCCGGTGGT CGGCCAGATG ACCGGCGCCC CGGCGCCCAC CGCGCCCTCC
GCCGCGGCCG CCGGCGAGCA GGCCGCCTCG GAGCTGAAGG CCGCCTTCCC GGCGCCGCAC
ATGCCGACCC CGCCGGCGCT GATGACCCCG GCGCACGCCG CCGGCAAGCG CAGCCGCGCC
GTCGCGCCGG TCGCGCCCGC GGTCACCGCC CCGACCATCA CCGCCCCGAC GGTCACCTCG
AGCCCGGCCG CCTCGGCCAA GCCGCAGAGC TCGCTGCCGG TCGTCGGCCA GCTGCCCACC
AGCAACCTGC CGGTCGTGGG CTCCCTGACC CAGGGCCTGC CGGTCGGCAG CCTGACCGGA
ATCCTCGGCG GCTTCTGA
 
Protein sequence
MSTLSTTVRR GLVVTAAAMA AGPVVGGVAS AATAPTTSVP LDTAPISTTA ATPALQAVAP 
LPVTRSALPI GGLDSVMPIS GGLANGLPVN GLTGGLPLNN IAGGLPVSGL AGQLPVVGPM
AQNLPVVGQM TGAPAPTAPS AAAAGEQAAS ELKAAFPAPH MPTPPALMTP AHAAGKRSRA
VAPVAPAVTA PTITAPTVTS SPAASAKPQS SLPVVGQLPT SNLPVVGSLT QGLPVGSLTG
ILGGF