| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7872 |
|---|
| Symbol | |
|---|
| ID | 8339248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9130872 |
|---|
| End bp | 9131915 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644960955 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003118536 |
|---|
| Protein GI | 256396972 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3662] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.831106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.186393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACC CCAGCGCCGA GGACGTTCCC GTCTCCCCCG AGCGGGGACC GCTGCGCAGC
CTCGACAACG GCTTCTTCGG CCCGGACTCG GTGAGCTGGA AGGTCTGGAC ATCGCCAACC
TCGCTGATCG GGTTCCAGCG CGCCGTAGTG CTCGAGCACT TCGATCCCCC TCTGGCCGCG
GCCGTCGCCG ACAGCGGCGG GATCTACCAA GACCCGCACG GGCGCCTCGA CCAGACCCTC
GCCTACTTCC TCACCGTCGC GGTCGGCGAC AGCCGTACTG TGATTCAGGC AGCCGAATTC
CTTATGCGCA TCCACGCTAA GGCGACTGGC GTAGAGCCCA TTACCGGGAA ACGCTATAGC
GCCAACAACC CGGAGTCCCA GCTGTGGATT CACCTAACGG GGTGGCACAG TGTCCTGAAG
TGTTACGAGC TCTATGGACC CGGGCGCTTG TCCAAGGCTG ATGAGGACCG CTACTGGGCC
GAGTGCCGCG TCGCCGCTGA GCTTCAGACC TGCGATCCCG CAGACGTCCC GCGCAATCGC
GAAGAGGTCA AGGCGTACTT CGAGAAAGTA CGTCCTCAGC TGTGTTCCTC AGAGCGTGCG
TATCGCGGGA TGCACTACCT GCTCTACCCG CCGTTGAAGA AGGTGGGGTT CCGGATCTGG
GCCGCGTCTC GTTTCACCGC TGTCCTGAGT ATCCATTCAC TGCCCATGTG GATGCGCCGC
ACAGGCGGAT TCCACCAGTG GCGGCTTATA GATTTCGGCA TCCGTCTCGC GCAGCCGTTC
ATCCGTATGG GCACCCGCAT CGCGAAGATG CCGCGCGTCG GCATTCCAGT GATCACTCCG
GTCGCGCCGG TCACCGGCAG GGTGCTGCGG CAGCACTATC GCTCTGCGGC GCCTGAGGAT
TCCGCGGTGG TCACACCGTC TCGCGGAAGG GAGCTGCACG GGACGATGGG ATCGCGGCGC
ACGACTACGG ACGCGAACGC GAACGCGAAC GCGGAACAGC TGACCGCGGT CAGCCCTGCT
CCTGCAACCG GTCCAGCTCG ATAG
|
|---|
| Protein sequence | MPHPSAEDVP VSPERGPLRS LDNGFFGPDS VSWKVWTSPT SLIGFQRAVV LEHFDPPLAA
AVADSGGIYQ DPHGRLDQTL AYFLTVAVGD SRTVIQAAEF LMRIHAKATG VEPITGKRYS
ANNPESQLWI HLTGWHSVLK CYELYGPGRL SKADEDRYWA ECRVAAELQT CDPADVPRNR
EEVKAYFEKV RPQLCSSERA YRGMHYLLYP PLKKVGFRIW AASRFTAVLS IHSLPMWMRR
TGGFHQWRLI DFGIRLAQPF IRMGTRIAKM PRVGIPVITP VAPVTGRVLR QHYRSAAPED
SAVVTPSRGR ELHGTMGSRR TTTDANANAN AEQLTAVSPA PATGPAR
|
|---|
| |