Gene Caci_7854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7854 
Symbol 
ID8339230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9110361 
End bp9110666 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content67% 
IMG OID644960937 
Productprotein of unknown function DUF1508 
Protein accessionYP_003118518 
Protein GI256396954 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.378531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.478674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGA AGTTCGAGCT CTACAAGGAC AAGGCTGGGA AGTTCCGTTT CCGCCTCAAG 
TCCGGCAACG GCCAGATCAT CGCGGTCGGC GAGGCGTACG AATCGAAGTC GAGTGCGATG
AGCGGTATCC AGTCGATCCG GTCCAACGCC GAGGCTGCGG CGCTGGTCGA CATGACCGAT
CAGCCCGCGC CCGCCGGACA GGCGATGCCA GCCGGACAAG CTATGTCAGC CGGGAAGGCG
ATGCCAGCCG GGAAGGGCGC GCCCGCAGGA CAGAGCGCGC CGATGGGCAA GCCCGGCCCG
AAGTAG
 
Protein sequence
MPGKFELYKD KAGKFRFRLK SGNGQIIAVG EAYESKSSAM SGIQSIRSNA EAAALVDMTD 
QPAPAGQAMP AGQAMSAGKA MPAGKGAPAG QSAPMGKPGP K