| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7728 |
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| Symbol | |
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| ID | 8339104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8966326 |
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| End bp | 8968005 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644960812 |
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| Product | hypothetical protein |
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| Protein accession | YP_003118393 |
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| Protein GI | 256396829 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTCG TGACCGAAGC CCAGCCCGAA ACCCCCCAGC CGCCGCACGG CGGCCAGATC
TCCGTCGAGG TGGCGCGAGC CCACGGCGTC GAGACCATGT TCACGCTCTC AGGCGGACAC
GTCTTCTCGC TCTACGACGG CGCGGTCAAG GCCGACCCGC CGCTGCCGAT CCTGGACGTC
CGCCACGAGC AGACCGCCGT GTTCGCCGCC GAGGCGACCG CCAAGCTGAC CCGCAAGCCC
GGCCTGGCGG TCCTGACCGC CGGCCCGGGC ATCACCAACG GCGTCTCGGC GGTGACCACC
GCGCATTTCA ACGGCTCGCC GGTGGTCGTG CTCGGCGGCC GGGCCGCGGA CTCCAACTGG
GGCAAGGGCG CGCTGCAGGA GCTGGACCAC CCGCCGCTGC TGGCTCCGGT GACCAAGCGC
TCGGCGACCG TGCACACCAC CGCGGCGCTG GCATCCGACC TCGACGACGC CTTCGCCCTC
GCCGACGCGC CGCACCGCGG ACCGGTCTTC CTCGACCTGT CCCTGGAGGC GGCGTTCGAC
GTCGACGCCA AGCCGCTGCC GACGGTCGGC GCCCGCGCGG CGCTCACCCC GGATCCCGAC
GCGCTCGCCG GCATCGGCGA TCTGCTCGCG CGCGCCGCCA AGCCGGTGCT CGTCCTGGGC
TCCGACGTCT GGATGGACGG CGCCGACACC GCCGCGCTGG CCTTCGCCGA GGAGACCGGG
GTCCCGGTCA TCACCAACGG CATGGGCCGC GGCATCCTGC CGCGCGGCCA CCGCCAGCTG
GTGACCCGGG CCCGCTCGGC CGCGTTCGGC GGCGCGGACC TGGTCATCGT CGTCGGCACT
CCGCTGGATT TCCGCCTGGG CTACGGATTG TTCGGTGGCC GGGACGGCAA CCCGCTCGCG
CCGGTGGTGC ACGTCGTCGA CTCGCCTGGA CAGCTGAGCG GCCACATCGG CCTGGCGGCG
AGCGCCGCCG GCGACCTGTC CGCGGCCTTC GAGGGCATCG CTGAGTCCTG GCGCAAGGCC
GCCAAGCCGG GCGCGTACGC GGACTGGCTG GCCGCCTTGC AGGACAAGGC CTCCACGGCT
ATCGCCGCCG ATCGCGACCT GCTGACCGCC GCCTCGGATC CGATCCACCC GGCGCGCATC
TACGGCGAGT TGCTGCCGCG CCTGGCCGAC GACGCGGTGG TGATCGGGGA CGGCGGCGAC
TTCGTCTCCT TCGCCGGCCG GTTCGTGGAG CCGGGCCGGG CCGGCTGCTG GCTGGACCCG
GGTCCGTACG GCTGCCTGGG CACCGGCCTT GGCTACGCGA TCGCCGCCCG GCTGGCGCGT
CCGACGTCCC AGGTGGTCCT GCTGGTCGGC GACGGCGCCG CGGGCTTCTC GCTGATGGAC
GTGGACACCC TGGTGCGGCA CGGGCTGCCG GTGGTCATGG TGATGGGCAA CAACGCGTGC
TGGGGGCTGG AGAAGCACCC GATGCAGGCG CTGTACGGCT ACGACGTCGC CGCGGACCTG
AACCCGGACG CGCGCTACGA CAAGGTCGTG CAGGCTCTCG GCGGCGGCGG GGAGTTCGTC
ACCGACCCGG CGCAGATCGG ACCGGCGCTG GACCGCGCCT TCGCCTCGGG AATCCCGTAC
CTGGTCAATA TCGCCACGGA CCAGACGATC GCCTATCCGA GATCGACCAC GGGGCTCTGA
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| Protein sequence | MTVVTEAQPE TPQPPHGGQI SVEVARAHGV ETMFTLSGGH VFSLYDGAVK ADPPLPILDV
RHEQTAVFAA EATAKLTRKP GLAVLTAGPG ITNGVSAVTT AHFNGSPVVV LGGRAADSNW
GKGALQELDH PPLLAPVTKR SATVHTTAAL ASDLDDAFAL ADAPHRGPVF LDLSLEAAFD
VDAKPLPTVG ARAALTPDPD ALAGIGDLLA RAAKPVLVLG SDVWMDGADT AALAFAEETG
VPVITNGMGR GILPRGHRQL VTRARSAAFG GADLVIVVGT PLDFRLGYGL FGGRDGNPLA
PVVHVVDSPG QLSGHIGLAA SAAGDLSAAF EGIAESWRKA AKPGAYADWL AALQDKASTA
IAADRDLLTA ASDPIHPARI YGELLPRLAD DAVVIGDGGD FVSFAGRFVE PGRAGCWLDP
GPYGCLGTGL GYAIAARLAR PTSQVVLLVG DGAAGFSLMD VDTLVRHGLP VVMVMGNNAC
WGLEKHPMQA LYGYDVAADL NPDARYDKVV QALGGGGEFV TDPAQIGPAL DRAFASGIPY
LVNIATDQTI AYPRSTTGL
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