Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7677 |
Symbol | |
ID | 8339053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8908645 |
End bp | 8909700 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960761 |
Product | Polyprenyl synthetase |
Protein accession | YP_003118342 |
Protein GI | 256396778 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTC CCGGCACGCT GACCCCGCCG CTTCATCAGA CGTCGTCGGG CTGGGGTCCG TTCGCAATCG CCATGCAGCA GGACGAGGCC CTGTCCGTGG CCCTCAAGGA CGGCCTGCTG CGCGTGGAGG AGGTGCTGCT GGAGTACACC CGCAGCGACC ACGCCTACAT CAGCGAGATC ACCTCGCACC TGGCCCAGGC CGGCGGCAAG CGCACCCGGC CGCTGCTGGT GCTGCTGGCC GCGCAGTTCG GCGACGCGGC CCGCGCCGGC GTCGTCGAGG CCGCCGTGGT GATCGAGCTG ACCCACCTGG CCACGCTCTA CCACGACGAC GTCATGGACG AGGCGGCCCT GCGCCGCGGC GTGGCCTCGG CGAACCAGCG CTGGGACAAC TCGCTGGCCA TCCTGTCCGG CGACTTCCTG TTCGCCCGCG CCTCGACCCT GCTCTCCGAG CTGGGACCGG ACGCCGTCCG GATCCAGGCG GAGACCTTCG AGCGTCTGGT GAGCGGCCAG ATCTCCGAGT CGGTGGGCCC GAAGAACGGC CAGAACCCGG TGGACCACCA CCTGGAAGTC CTGGCCGGCA AGACCGGCTC GCTGATCGCC ACCGCCGCCC GCTTCGGCGC CATGTTCGCC GGCTGCACCG CGGAGCAGGA ACGCATACTG GCGGACTTCG GCGAACTGTT CGGCGTCGCC TTCCAACTCT CCGACGACCT CCTGGACATC GCCTCGGAAT CCGAGCAGTC CGGCAAGACC CCCGGCATCG ACCTCCGCGA AGGTGTCCAC ACCCTCCCGA TGCTGATCGC CCTGGCGATG GACGGCTCAG CCGACCCCGA GACCGCCCGC CTGCAGGACC TCCTGCACAC CGACCTGTCG ACCGACGACG CCGCCTTCGA CGAGGCGCTG GCACTCCTGC GCGCGCACCC GAGCATGGGA CAGGCCCGGG ACGTCGTGCG CGGATACGCG GAGAAGGCGA AGTCGGTGCT GGAGCCCCTG CCGGAGGTGC CGGCGAAGGA AGCGCTGCGC GCGGTGTGCG ACGTGGTGAT CTCGCGGACG GTGTAG
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Protein sequence | MSTPGTLTPP LHQTSSGWGP FAIAMQQDEA LSVALKDGLL RVEEVLLEYT RSDHAYISEI TSHLAQAGGK RTRPLLVLLA AQFGDAARAG VVEAAVVIEL THLATLYHDD VMDEAALRRG VASANQRWDN SLAILSGDFL FARASTLLSE LGPDAVRIQA ETFERLVSGQ ISESVGPKNG QNPVDHHLEV LAGKTGSLIA TAARFGAMFA GCTAEQERIL ADFGELFGVA FQLSDDLLDI ASESEQSGKT PGIDLREGVH TLPMLIALAM DGSADPETAR LQDLLHTDLS TDDAAFDEAL ALLRAHPSMG QARDVVRGYA EKAKSVLEPL PEVPAKEALR AVCDVVISRT V
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