Gene Caci_7677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7677 
Symbol 
ID8339053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8908645 
End bp8909700 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content71% 
IMG OID644960761 
ProductPolyprenyl synthetase 
Protein accessionYP_003118342 
Protein GI256396778 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACTC CCGGCACGCT GACCCCGCCG CTTCATCAGA CGTCGTCGGG CTGGGGTCCG 
TTCGCAATCG CCATGCAGCA GGACGAGGCC CTGTCCGTGG CCCTCAAGGA CGGCCTGCTG
CGCGTGGAGG AGGTGCTGCT GGAGTACACC CGCAGCGACC ACGCCTACAT CAGCGAGATC
ACCTCGCACC TGGCCCAGGC CGGCGGCAAG CGCACCCGGC CGCTGCTGGT GCTGCTGGCC
GCGCAGTTCG GCGACGCGGC CCGCGCCGGC GTCGTCGAGG CCGCCGTGGT GATCGAGCTG
ACCCACCTGG CCACGCTCTA CCACGACGAC GTCATGGACG AGGCGGCCCT GCGCCGCGGC
GTGGCCTCGG CGAACCAGCG CTGGGACAAC TCGCTGGCCA TCCTGTCCGG CGACTTCCTG
TTCGCCCGCG CCTCGACCCT GCTCTCCGAG CTGGGACCGG ACGCCGTCCG GATCCAGGCG
GAGACCTTCG AGCGTCTGGT GAGCGGCCAG ATCTCCGAGT CGGTGGGCCC GAAGAACGGC
CAGAACCCGG TGGACCACCA CCTGGAAGTC CTGGCCGGCA AGACCGGCTC GCTGATCGCC
ACCGCCGCCC GCTTCGGCGC CATGTTCGCC GGCTGCACCG CGGAGCAGGA ACGCATACTG
GCGGACTTCG GCGAACTGTT CGGCGTCGCC TTCCAACTCT CCGACGACCT CCTGGACATC
GCCTCGGAAT CCGAGCAGTC CGGCAAGACC CCCGGCATCG ACCTCCGCGA AGGTGTCCAC
ACCCTCCCGA TGCTGATCGC CCTGGCGATG GACGGCTCAG CCGACCCCGA GACCGCCCGC
CTGCAGGACC TCCTGCACAC CGACCTGTCG ACCGACGACG CCGCCTTCGA CGAGGCGCTG
GCACTCCTGC GCGCGCACCC GAGCATGGGA CAGGCCCGGG ACGTCGTGCG CGGATACGCG
GAGAAGGCGA AGTCGGTGCT GGAGCCCCTG CCGGAGGTGC CGGCGAAGGA AGCGCTGCGC
GCGGTGTGCG ACGTGGTGAT CTCGCGGACG GTGTAG
 
Protein sequence
MSTPGTLTPP LHQTSSGWGP FAIAMQQDEA LSVALKDGLL RVEEVLLEYT RSDHAYISEI 
TSHLAQAGGK RTRPLLVLLA AQFGDAARAG VVEAAVVIEL THLATLYHDD VMDEAALRRG
VASANQRWDN SLAILSGDFL FARASTLLSE LGPDAVRIQA ETFERLVSGQ ISESVGPKNG
QNPVDHHLEV LAGKTGSLIA TAARFGAMFA GCTAEQERIL ADFGELFGVA FQLSDDLLDI
ASESEQSGKT PGIDLREGVH TLPMLIALAM DGSADPETAR LQDLLHTDLS TDDAAFDEAL
ALLRAHPSMG QARDVVRGYA EKAKSVLEPL PEVPAKEALR AVCDVVISRT V