Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7672 |
Symbol | |
ID | 8339048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8901770 |
End bp | 8902789 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960756 |
Product | thiamine pyrophosphate protein domain protein TPP-binding |
Protein accession | YP_003118337 |
Protein GI | 256396773 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAC TGCTGAAACT CACGACCAAG GACTTCAAGA CCGACCAGGA AGTGCGCTGG TGCCCCGGCT GCGGGGACTA CGCGATCCTG GCCGCGGTCC AGGGGTTCAT GCCCTCCCTG GGCATCGCCC GGGAGGACAT CGTCTTCGTC TCCGGGATCG GCTGCTCCTC GCGTTTCCCG TATTACATGA ACACCTACGG GATGCACTCC ATCCACGGCC GCGCCCCGGC GATCGCCACC GGCCTGGCCT CCTCCCGGCC CGACCTGTCG GTGTGGGTGG TGACCGGCGA CGGCGACGCG CTGTCCATCG GCGGCAACCA CCTGATCCAC GCGCTGCGCC GGAACGTCAA TCTGAAGATC CTGCTGTTCA ACAACCGGAT CTACGGGCTG ACCAAGGGCC AGTACTCGCC GACCTCCGAG CAGGGCAAGA TCACCAAGAG CACGCCGTAC GGGTCGCTGG ACGCCCCGTT CAACCCGGTC TCGCTCGCCC TGGGCGCCGA GGCCACCTTC GTGGCCCGGA CCATCGACTC CGACCGCAAG CACCTGACCT CGGTGCTGCA GGCCGCGGCC GAGCACGAGG GCACGGCGCT GATCGAGATC TACCAGAACT GCAACATCTT CAACGACGGC GCCTTCGAGA ACCTGAAGGA CAACTCCGTC CGGGACCGGC ACCTGATCCG GCTGGAGCAC GGGCAGCCGA TCGCGTTCGG ACCCGAGGAC GAGCGCTACG GCATCGTCCG CATGCCCGAC GCCACGCTGA AGGTGGTCCC GCTGGAGCAG GCCGGGGACG CGGTGCTGGT GCACGACGCC CACGCCCCGG AGCCGGACCT GGCCTTCGCG CTGTCCCGGC TGCCGGACCC GGCCACGCTC TCGCCGACGC CGATCGGCGT CTTCCGGGAC GTCACCCGGC CGACCTACGA CACCCTGATG GCCGAACAGC TCGACGAGGC CGCGCGGACC CTGGGTTCGG GCAAGCTCGC CGAACTCCTG ACGGGGTCCG ACACGTGGAC CATCGCGTGA
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Protein sequence | MPELLKLTTK DFKTDQEVRW CPGCGDYAIL AAVQGFMPSL GIAREDIVFV SGIGCSSRFP YYMNTYGMHS IHGRAPAIAT GLASSRPDLS VWVVTGDGDA LSIGGNHLIH ALRRNVNLKI LLFNNRIYGL TKGQYSPTSE QGKITKSTPY GSLDAPFNPV SLALGAEATF VARTIDSDRK HLTSVLQAAA EHEGTALIEI YQNCNIFNDG AFENLKDNSV RDRHLIRLEH GQPIAFGPED ERYGIVRMPD ATLKVVPLEQ AGDAVLVHDA HAPEPDLAFA LSRLPDPATL SPTPIGVFRD VTRPTYDTLM AEQLDEAART LGSGKLAELL TGSDTWTIA
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