Gene Caci_7640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7640 
Symbol 
ID8339016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8865907 
End bp8867163 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content70% 
IMG OID644960724 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003118305 
Protein GI256396741 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTAG TCGTCGCCGG CCAGGGGTAC GTCGGCCTGC CGCTCGCGGT CCGGGCGGCC 
GAGGTGGGGC ACCGGGTCGT GGGCTACGAC GTGGACCCGC ACCGGGTGAA GCAGCTGGCG
GCCGGCGAGT CCTACGTCGA GGACGTCTCC TCCGAGCGCA TCCGTGCGGC CCTGGACTCC
GGCGCCTACT CCGCGACCTC CGACGCCGCC GCACTGGCCG GGTTCGACCT GGCGGTCATC
ACCGTGCCGA CCCCGCTGCG CGACGGCGTG CCGGACCTGA GCTACATCGA GTCCTGCGCC
CGCACGCTGG GCGCGCACCT GCGCCCCGGC GCGACCGTGG TGCTGGAGTC CACGACCTAC
CCGGGCACCA CCGAGGAACT GATGGTCCCG ATCCTGGAGG AGCTCTCCGG GCTGACCGCG
GGGCGGGACT TCCACGCCGG GTTCAGCCCC GAGCGCATCG ACCCGGGGAA CCAGAACTGG
CCGTTCGAGA AGACCCCGAA GGTGGTCTCC GGCGTCGACG CGGACTCCCT GGCGGTGGTC
AAGGCCTTCT ACGACGATCT GGTGGAGACC ACGGTCCCGG TCTCCGGTCC GAAGGAGGCC
GAGCTCGCCA AGCTGATCGA GAACACCTTC CGGCACGTGA ACATCGCGCT GGTGAACGAG
ATAGCGATGT TCGCCAAGGC GCTCGGCGTG GACGTCTGGG AGGCGATCGG CGCCGCGGCG
TCCAAGCCCT TCGGCTTCAT GAAGTTCACC CCCGGTCCCG GCGTCGGCGG CCACTGCCTG
CCGATCGACC CCTCCTTCCT GTCCTGGAAG GTCGAGCGCA CGGTCGGCGT CCCGTTCCGC
TTCGTGGAGC TGGCGAACGA CGTGAACAAC CACATGCCGG ACTACGTCGT GCGGCGCCTG
ATGGAAGCGC TGAACGCGCG GCGGCAGACC GTCAACGGCT CGCGCGTCCT GTTGCTGGGC
CTGGCCTACA AGCCGAACAC CTCCGACGCC CGCGAGTCGC CCTCGACGCG GGTCGCTGAA
CTGCTGCTGG ACCTGGGCGC CCAGGTGCGC GGCGCCGACC CGCACGTGGT CGACGACATC
CACGCCGACG CCCGGCTGGT CCGGGTGGAG GCCACCGCCG AGGAGATCGC CGCCGCCGAC
GCGGTGGTGT TGCTGGCCGA CCACGCAGAG TTCGATTACG CCGCTGTGGC GAATCACGCG
AAATATGTTC TCGACTGTCG GAACCGGTTG GCGGGCCCAA ACGTCGAAGT GTTGTAG
 
Protein sequence
MHVVVAGQGY VGLPLAVRAA EVGHRVVGYD VDPHRVKQLA AGESYVEDVS SERIRAALDS 
GAYSATSDAA ALAGFDLAVI TVPTPLRDGV PDLSYIESCA RTLGAHLRPG ATVVLESTTY
PGTTEELMVP ILEELSGLTA GRDFHAGFSP ERIDPGNQNW PFEKTPKVVS GVDADSLAVV
KAFYDDLVET TVPVSGPKEA ELAKLIENTF RHVNIALVNE IAMFAKALGV DVWEAIGAAA
SKPFGFMKFT PGPGVGGHCL PIDPSFLSWK VERTVGVPFR FVELANDVNN HMPDYVVRRL
MEALNARRQT VNGSRVLLLG LAYKPNTSDA RESPSTRVAE LLLDLGAQVR GADPHVVDDI
HADARLVRVE ATAEEIAAAD AVVLLADHAE FDYAAVANHA KYVLDCRNRL AGPNVEVL