Gene Caci_7600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7600 
Symbol 
ID8338976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8819588 
End bp8820589 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID644960684 
Productprotein of unknown function DUF95 transmembrane 
Protein accessionYP_003118265 
Protein GI256396701 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0773481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0891448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG ACGCATACTC GGCGGCGCAC CGCGCGGAGT GGTCGCGCCT CGCACAGTTG 
TCGAGCCGCA GCCGGGCTCT GGACGGCGCC GAAGCGGACG AACTGGTCGC GCTCTACCAG
AACGTCGCCA CGCACTTGTC CGTAGTGCGC TCCGCTATGC CGGACGCAGT AGTGGTCGGT
CACCTGTCAT CCCTCCTAGC GACCGCGCGC GGCGCCATCG CCGGACCGCG CGTTCCGGCG
TGGAGGGAGA TCCTCTACTT CTTCACCGAT GGCTTCCCCG CCGCGCTCTA TAGAGCGCGA
CGCTGGTGGA TCGCCACTGC GGTGGTGTCA CTGGTGGCTG CGTTCTTCAT GGGCTGGTAC
ATCGCGGCGA ATCCGCGAGT ACAAGGAGAG CTGGCCTCTC CCGATCTCGT GAACGGGGTC
TTCCGTCCCG GCGGTCAGTT CGAGACGTAC TACACGGAGT TCAGCCCGGG CTCGTTCGGG
TTCAAGGTGT GGGTGAACAA CGCCTGGGTG TCCGCGCTCG CGTTGTTCGG GGGCGTGACG
CTGGTCTTCC CCTTCATCGC CATGTACATG AACACGGCGA ACTTGGCCGT CGACGGCGGC
TTCATGGCGG CACACGGCCG CTTCGGCACG TTCCTGTCGC TCGTCGCCCC GCACGGGATG
CTGGAACTCA CCGCGGTCTT CGTCGCCGGC GGATGTGGGA TGCGCATCGC GTGGACGCTC
CTGTCTCCGG GACCGCGTAC CCGGGGCGAG GCACTGGGGG AGCAGGGACG GGTGCTCGGG
ACGATGGCGC TCGGGCTGGC GTGCGTGCTG CTGGTGTCCG GCTCGATCGA GGGGTTCGTG
ACGGGGCACA CGTCCGCGCC GGTTCGTCTG ACCATCGGAT TCGCCGCCGA GTCGTTGTTC
CTCGTATACG TGTTCTTCAT CGGCCGGCGG TCTGCGCTGC GGGGCGAGAC AGGTGACGTG
AGCAGGGCGG ACAGAGCGGA CGCGGTACCC ACGAGGGCTT AG
 
Protein sequence
MDIDAYSAAH RAEWSRLAQL SSRSRALDGA EADELVALYQ NVATHLSVVR SAMPDAVVVG 
HLSSLLATAR GAIAGPRVPA WREILYFFTD GFPAALYRAR RWWIATAVVS LVAAFFMGWY
IAANPRVQGE LASPDLVNGV FRPGGQFETY YTEFSPGSFG FKVWVNNAWV SALALFGGVT
LVFPFIAMYM NTANLAVDGG FMAAHGRFGT FLSLVAPHGM LELTAVFVAG GCGMRIAWTL
LSPGPRTRGE ALGEQGRVLG TMALGLACVL LVSGSIEGFV TGHTSAPVRL TIGFAAESLF
LVYVFFIGRR SALRGETGDV SRADRADAVP TRA