Gene Caci_7580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7580 
Symbol 
ID8338952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8788083 
End bp8788757 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID644960660 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003118245 
Protein GI256396681 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGA ATCATGAACC GCTGCACCTC GTCTGGGACT GGAACGGCAC CGTCCTGAAC 
GACTTCGAGA TCATCCTGCG TTCCACGAAT GACTCGTTCA CCGATCACGG GTTGCCCGCG
ATAACGGCTG AGCAGTACCG GACGCTGATC AAGATGCCGA TCCGTGCCTT CTACGCCGAC
ATCCTCGGTC ACGAGCCCGG CGATGAGGAG TGGGAGGGGC TGGACGCCAC TTTCCACAAG
TACTACGTCG CCTATGAGCG CGAGGCTCGG CTGTCCGACG GTCTGCCGGA CCTGTTCCGT
GAGTGGTCCG GGCGCGGGCA TTCGCAGTCG CTGCTGTCGA TGTATCACGA CGACAAGCTC
GTCCCCGTCG TCCAGCACCA TGGCATCGCC CATTACTTCG AGCTGGTTCA GGGCACTCTG
CCGCCGCGTC CGTCGCGCAA GGGACTGCAC CTCCAGGACC ACCTGACCCG TCTGCGCGTG
GATCCTGCGC GGGTGGTTCT CATCGGCGAC TCGCCCGACG ACGCCGCGGC TGCCGCCAGT
GTCGGCGCGC GCGTGATCCT CTACTCCGGC GGGTTCGCTG CCGCGCAGTC GCTGCGGGCT
GTCGGGGTGC CGATCGCGGA CAGTCTGACC GCTGCTGTGG CGCTGATCGA CGAGGTCATG
GCCGCCGAGG GCTGA
 
Protein sequence
MPKNHEPLHL VWDWNGTVLN DFEIILRSTN DSFTDHGLPA ITAEQYRTLI KMPIRAFYAD 
ILGHEPGDEE WEGLDATFHK YYVAYEREAR LSDGLPDLFR EWSGRGHSQS LLSMYHDDKL
VPVVQHHGIA HYFELVQGTL PPRPSRKGLH LQDHLTRLRV DPARVVLIGD SPDDAAAAAS
VGARVILYSG GFAAAQSLRA VGVPIADSLT AAVALIDEVM AAEG