Gene Caci_7567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7567 
Symbol 
ID8338938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8768189 
End bp8769070 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content70% 
IMG OID644960646 
Producthypothetical protein 
Protein accessionYP_003118232 
Protein GI256396668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.821021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.888689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAC ACGAACTGAG CGGGCCGGAC CGGCTCGCCT TCGAGGGGAT CCACCGGCTG 
AAAGTGGTCA CCACCTCGGG CCGGGTCGAC GTGGTCGGAG CCGGCGAGGA CGGCGCGGCC
GTGGTCGACG TGACCCGGGT CAAGGGCGAG GAGCCGCTGG TCGTCGCGGC CGAGGACGGC
GAGCTGACGG TGCGGCACGG GGAGTTCCGG CCGAACGTGC TCGGCTGGCT GATGCACGGC
CGCAAGATCG AGGCCGACAT CTCCATCCAG GTGCCGCCGG ACTGCCTGGT GGACGTCACG
GTGGTCTCCG GGCCGCTGGT GGTGTCCAAC CTGCACGAGC GCACCCGGGT CCAGGGCGTG
TCCGGCGAGA TCACGCTGGC CCAGCTGCAC GGGCCCACCG ACGTCAAGAC GGTCTCCGGG
GCGATCACCG CCGAGAGCGT GACCGACGAC CTGAGCGCGC ACACCGTCTC CGGGGCGATC
ACCGTGATCG CCCTCGGGAC GCAGAACAAG ATCAAGGCCG GGACCACCTC GGGCGCGATC
ACCGTGGACC TGGAGGACGG CACCGACGCC CCGCGCCTGG AGCTGAACGT GGTCTCCGGG
CAGGTCATCG TCCGCGCCCC GGAAGATGCG AACCTGGAGG TGGACATGTC CACGATGAGC
GGCCGCACGG TCACCACCTT CGACGGTCTG GACTCCCAGC CGCTGTTCGG GAACAAGCAG
ATCCCCTTCA CCAAGCCGCG GCAGCTGTCC GGACGTTTGG GTACCGGGCA GGGGAGGCTT
AAGGCACGGG CGGTGTCCGG TGACATGACG CTGCTGAGAA GGGCCGTCGA CCCCGAGCTC
TCGGGCTCGG ACGTGGACGG CGAAGATGGA GAGGATCGTT AG
 
Protein sequence
MTRHELSGPD RLAFEGIHRL KVVTTSGRVD VVGAGEDGAA VVDVTRVKGE EPLVVAAEDG 
ELTVRHGEFR PNVLGWLMHG RKIEADISIQ VPPDCLVDVT VVSGPLVVSN LHERTRVQGV
SGEITLAQLH GPTDVKTVSG AITAESVTDD LSAHTVSGAI TVIALGTQNK IKAGTTSGAI
TVDLEDGTDA PRLELNVVSG QVIVRAPEDA NLEVDMSTMS GRTVTTFDGL DSQPLFGNKQ
IPFTKPRQLS GRLGTGQGRL KARAVSGDMT LLRRAVDPEL SGSDVDGEDG EDR