| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7540 |
|---|
| Symbol | |
|---|
| ID | 8338910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8737785 |
|---|
| End bp | 8738282 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644960619 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003118206 |
|---|
| Protein GI | 256396642 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.398486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA CCGCCGCCGA GATCGCCGAG GCGTGGCGCC GCGAGCGCCC GGGCACCCCG
GTCGACGCGA TCGAGGTCTT CACCCCGATC GTGCGGCTGG CCAAGCTGCT CACCGACGAC
CGGACCCGCG TCCTGCGCGC CGCCGGGATC GACACGGCGA CCTTGGACCT GCTGTCCGTG
CTGCGCCGCT CCGGTCCGCC TTACACCCTC ACCACGCGCG AACTCACCGA GCGGACGCTG
GTGACCGCCG GGGCGATCTC GCAGCGGGTC GCGCGCGCCG AGCAGGAAGG GCTGGTCACC
AGGGCGCCCG ATCGCTCAGG ACACAAAGCG GTGGCCGTCT CGCTGACGGC AGCCGGACAC
GCGGTGATCG AGCGTTCCGT GGACGCGGTG CTCGGGCGCG ACTCGGAGTT GGTCGCGGGT
CTCACCGTCG AGGAGCGGGA GGTGGTGATC CCGCTCCTCG ACAAGCTCGA GGGCTTCGTC
AGGGCGCGCA CCGCCTGA
|
|---|
| Protein sequence | MSTTAAEIAE AWRRERPGTP VDAIEVFTPI VRLAKLLTDD RTRVLRAAGI DTATLDLLSV
LRRSGPPYTL TTRELTERTL VTAGAISQRV ARAEQEGLVT RAPDRSGHKA VAVSLTAAGH
AVIERSVDAV LGRDSELVAG LTVEEREVVI PLLDKLEGFV RARTA
|
|---|
| |