Gene Caci_7454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7454 
Symbol 
ID8338824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8641602 
End bp8643020 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content69% 
IMG OID644960533 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003118120 
Protein GI256396556 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR03374] 1-pyrroline dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0272918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.363977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAGA TCCCTGATGT CCTCAATGTT GTCGGCGGGC AGGAATCTGC GGCGGTCTCC 
GGCGCGCGGC TGGATCTGGT CGATCCGTCG ACCGGCCGGG TCGCTGGGCG CTCGGCGTTG
TCCGGCGCTG AGGACGTCGA CGCCGCGTGC GCTGCCGCGG CCTCGGCTTT CGAGTCCTGG
TCGGTGACCA CGCCTGCTGA ACGACAGCGG GCGTTGCTGC GTATCGCCGA TGGCGTCGAA
GCGCGCGCCG AGGCTTTCGC CGACGCGGAG GTGCGCGAGA CCGGCAAGCC GCGCGCGTTA
TTCCTTCGGG ACGAGTTCCC GGCGATCGTC GACGCGCTGC GGTTCTTCGC CGGGGCGGCT
CGGAACATGC CGGGTGTGGC TGCGGCGGAG TACGTCGAAG GCCGGACCTC GGCGCTGCGT
CGGGAGCCGG TCGGTGTGTG CGCGCAGATC ACGCCGTGGA ACTATCCGCT GATGATGGCT
GCGTGGAAGC TCGCGCCGGC TGTGGCTGCG GGTAACAGCA CGGTGTTGAA GCCTGCTGAC
ACCACGCCTT CGTCGGCGTC TTTGCTCGCG CGCGTCGCTG CGGAGCACCT GCCGCCGGGC
GTCGTCAATG TCGTGTGCGG TGATCGGGAG ACCGGGCGTG CGTTGGTGGC GCATCCGGCG
GTTCGCCTTG TCGCCGTGAC CGGGAGCGTC CGTGCCGGTC GGGAGATCGC GGCTGTGTGT
GCCGGTGATC TCAAGCGTGT TCATCTGGAG CTTGGGGGGA ACGCGCCGGT TGTCATCCAC
GACGACGTCG ATGTGGAGGC GACGGCAGCC GAGGTGGCTG CCGTCGCGTT CTACAACGCC
GGGCAGGACT GCACTGCTGC GACGCGGTTG CTAGTGCACG CTTCGATCCA CGACGCCTTT
GTGGATGCGT TCGCGAAGCA AGTGGCTGCG CTGCGCACCG GTCCGGTCGC CGATGCCGAC
TTCGGTCCTC TGAACAGCGC GGCGCAACTA TCGGCGGTGC GCGGTGTTCT GGAGCGGCTG
CCGGCGCACG CGGACGTGGT CGTGGGAGGC CGCGCGCTTG ACGGCGCCGG CTGGTACCAC
GAGCCGACGG TGGTCGTGCA GGTCCGGCAG GACGACGAGA TCGTGCAGGA GGAGACGTTC
GGGCCGGTCG TCACGGTGCA GCCGTTCGGT ACCGAGGCCG AGGCGATGGC GCTGGCGAAC
GGGGTTCGGT TCGGACTCGC GGCGAGCGTG TGGACGCGCG ATCACGACCG GGCGATGCGG
GCCGTACGCG GGTTCCAGAC CGGCATCGCC TGGGTCAACA CGCATGGCAC GACGGTGTCC
GAGATGCCGC ACGGCGGGGT CAAGCACTCC GGGTACGGCA GTGATCTGGC GATGTCCGGG
TTGCTTGATT ACACGCAGGT CAAGCACGTC ATGATCTGA
 
Protein sequence
MDEIPDVLNV VGGQESAAVS GARLDLVDPS TGRVAGRSAL SGAEDVDAAC AAAASAFESW 
SVTTPAERQR ALLRIADGVE ARAEAFADAE VRETGKPRAL FLRDEFPAIV DALRFFAGAA
RNMPGVAAAE YVEGRTSALR REPVGVCAQI TPWNYPLMMA AWKLAPAVAA GNSTVLKPAD
TTPSSASLLA RVAAEHLPPG VVNVVCGDRE TGRALVAHPA VRLVAVTGSV RAGREIAAVC
AGDLKRVHLE LGGNAPVVIH DDVDVEATAA EVAAVAFYNA GQDCTAATRL LVHASIHDAF
VDAFAKQVAA LRTGPVADAD FGPLNSAAQL SAVRGVLERL PAHADVVVGG RALDGAGWYH
EPTVVVQVRQ DDEIVQEETF GPVVTVQPFG TEAEAMALAN GVRFGLAASV WTRDHDRAMR
AVRGFQTGIA WVNTHGTTVS EMPHGGVKHS GYGSDLAMSG LLDYTQVKHV MI