| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7451 |
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| Symbol | |
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| ID | 8338821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8638228 |
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| End bp | 8639151 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960530 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003118117 |
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| Protein GI | 256396553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0488544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CGACGCACCC TTCCCCACAA CCCGCTTCCC CGCAGTCCTC TGCCCACCAG
GGCCCTGCCC CGCAGCCCGC CTCGCGGCGC CGCCGGTTCC GTCCGCGCCG ACGCGGCGTC
GAGGCCAAGC CCCGCTTCGC GATCGTGGTC ACCGCGCTGT TCTTCGTGCT GCTCTACCTG
CCGATCGCCA TGGTGGTGCT GTTCTCCTTC AACTCCCAGA AGTCGCTGAC GGTCTTCAAG
CACTTCAGCA CTCGGTGGTA CTCGGCCTTC TTCCACGACC ACGTCCTGCT GTCCTCGCTG
GGCATGAGCT TGAAGATCTC GCTGGTCGCG ATGATCGGCT CGGTGGTGCT CGGCGTGGCG
CTCGCTCTGG GCTTGGTCCG CGCGCGGGGC AGGCTCGGTA CGTACTCCGG CTTGATCATG
CTGGTCCCGC TGATCACCCC GGAGATCGTC ACCGGCGTGG CGTCGCTGAT GCTCTACAAG
GGTCTGAACA TCACGCTGTC CACCGGCACA GTGATGATCT CCGAGATCAC CTTCTCCATC
TCCTATGTGA CGGTGATCCT GCGCTCGCGG GTCGCCGCGC TCAACCCGGA GGTCGAAGAG
GCCGCCATGG ACCTCGGCGC GACGCGGTGG CAGGCGTTGC GGCTGGTGAC GCTACCCGCG
CTGCTGCCGG CCATCCTGGC CAGCGCCGTG CTGATCTTCG CCCTGGTCTT CGACGACTTC
GTCCTGGCCT ACTTCACCAC CGGCGTGGAT CCGCAGCCGC TGGCGGTCCG CATCTACTCC
GCCATCCGCT TCGGCGTCGA GCCGACCATC AACGCCGTCG GCACGCTGAT GCTGGCCGGT
TCCATCACCC TCATCGCCGT GGCCCTGTCC ATCCCGCGTC TGTTCGGCCG CTCCGGCGGC
CTCGACCTCC TGTCCGGGGA CTGA
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| Protein sequence | MTAATHPSPQ PASPQSSAHQ GPAPQPASRR RRFRPRRRGV EAKPRFAIVV TALFFVLLYL
PIAMVVLFSF NSQKSLTVFK HFSTRWYSAF FHDHVLLSSL GMSLKISLVA MIGSVVLGVA
LALGLVRARG RLGTYSGLIM LVPLITPEIV TGVASLMLYK GLNITLSTGT VMISEITFSI
SYVTVILRSR VAALNPEVEE AAMDLGATRW QALRLVTLPA LLPAILASAV LIFALVFDDF
VLAYFTTGVD PQPLAVRIYS AIRFGVEPTI NAVGTLMLAG SITLIAVALS IPRLFGRSGG
LDLLSGD
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