Gene Caci_7445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7445 
Symbol 
ID8338815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8632182 
End bp8633438 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content72% 
IMG OID644960524 
ProductRespiratory-chain NADH dehydrogenase domain 51 kDa subunit 
Protein accessionYP_003118111 
Protein GI256396547 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TCCATTCCCT GATGCCGGGT TCCGCGCCGC TGCTCGGCGA AAGACCCGAC 
CGGCGTGAAG CCCGTGATGC CTATTGGCAC GCTGGCGGTT ACCGCGACCT GTCGCCGGAT
CTGCTGGTGA ACCGCATCAA GGCGGCAGGG CTGCGCGGCC GGGGTGGCGC CGGCTTCCCG
GCGGCAGCCA AGCTGCTCGC CGTGCGCGCC GCCGGCTCGG TCCCGGTCGT CGTCGCCAAC
GGCGGCGAAG GAGAACCGGG ATCGGTCAAG GACCGCTGGC TGATGCGGGC GCGGCCGCAC
CTCGTCCTGG ACGGGATGTT GCGCGCCGCC GACATCACCC GCGCCGCACG CTGCTACGTC
TACGTGGCCG ACGACGAGGC CGCCGAGAGC ATGCGTCGCG CGCTGGCCGA GCGGGAGCCG
TACGTGCCCA CGCAGATCGT GCGGGTCGCG CACACCTATG TCGCCGGCGA GGAGACGGCG
GTGGTCCGGC GGATCAACGG CGGGCCCGCA CTGCCGACCG CGAAACCGCC GCGACCCTTT
GAATCCGGTG TCGACGGCGT CCCGACGCTC GTCGCGAACG TCGAGACTCT GGCGCGGATC
GCGCTGCTGG CCGCACGGCC ACAGACCCCG GACTCACTGC TGCTGACGGT CTCCGGTCCG
GGTCTGGAAC CGGAACTGGT CGAGGCGCCG GTCGGCACGT CGTTGCAGGC GCTGGCCTAC
CGCGCGGACC GGCTCGGTAC TCCTGGCGTC CTGATGGGCG GCATGTTCGG AGGAATCCTC
GATCCCCGCG GCCTGCGGAC CGAACTCGAA GCGGCGGCGC TGACCGCGGC GGGATCGGCG
CTCGGCTGCG GAGCCGTGCA CTTCCTCGCG CCTGGCGAGT GTCCGGTGGC GCTCGCCGCC
GAGGGATTGG CGTTTCTCGC CGATGAGAGC AGCCGTCAGT GCGGGGTGTG CGTCACCGGG
ACTGCCGCGT TGGCGCGCAC GATGGCGTCC GCGGTCCACG GCACCGCCGA GCCTGACGAC
CTGGCTCGGC TGAGCAAGTG GTCGCAAAGC CTGCGCCGTC GTGGCGCGTG CGGCCTGCTC
GACGCCGCGG CGAACCTCGC TGCCTCTCTG CTGCGCTCCT TCGGCCCGCT CACCGAAGCC
CACATCGAAG GACGCAGCCC TTGTTGCCTG TCCGACCGGC TGCTGGAAGC TGACCGGTTC
CGGGTGGCGC CTCCGACCGT CTTCGCCATC AGTCAGCCCA TATCAGCACC GCGATAG
 
Protein sequence
MTQIHSLMPG SAPLLGERPD RREARDAYWH AGGYRDLSPD LLVNRIKAAG LRGRGGAGFP 
AAAKLLAVRA AGSVPVVVAN GGEGEPGSVK DRWLMRARPH LVLDGMLRAA DITRAARCYV
YVADDEAAES MRRALAEREP YVPTQIVRVA HTYVAGEETA VVRRINGGPA LPTAKPPRPF
ESGVDGVPTL VANVETLARI ALLAARPQTP DSLLLTVSGP GLEPELVEAP VGTSLQALAY
RADRLGTPGV LMGGMFGGIL DPRGLRTELE AAALTAAGSA LGCGAVHFLA PGECPVALAA
EGLAFLADES SRQCGVCVTG TAALARTMAS AVHGTAEPDD LARLSKWSQS LRRRGACGLL
DAAANLAASL LRSFGPLTEA HIEGRSPCCL SDRLLEADRF RVAPPTVFAI SQPISAPR