Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7408 |
Symbol | |
ID | 8338778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8591614 |
End bp | 8592342 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960488 |
Product | integral membrane protein |
Protein accession | YP_003118075 |
Protein GI | 256396511 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCG ACACCACGAC GAAGACCCCC GCCGGCGGGG ATGCGCCCAA GAAAAAGGGC CGGCTGACGC AGATCCGCGA GGTCTACGGG ATGACCCGCA AGGAGGATCC CAAGCTTCCG CTGGTTCTGG CCGCTTGGGC CCTGGGCGCC CTGGTGGTGT TCGTGGCGCT GGGCGTCCTG CTCGGCTCCC CGCTGTTCTA CGGGATCTTC GGCATCCCGG TCGCGGTGCT GGCCGCGATG ATCGTCTTCG GACGGCGGGC CCAGCGCGCG GCCTACTCCT CCATCAAGGA CCAGGCCGGC GCGGCCGCCT CGGTGCTGGA CACGCTGCGC CGCGGCTGGG ACGTCACCCC TGGCGTGCGC TTCAACCGGC AGCAGGACAT GATCCACCGG GTGCTGGGGC GTCCGGGCAT CATCCTGGTC GGCGAGGGCA ACCCGAACCG GCTCAAGGCG CTGTTCACCG AGGAGCGCCG GCACCTGACC CGGCTGTTCG GCCCGGACGT GCCGCTGGTC GCCCAGGACA TCGTGGCTGG CGACGAGGAG GGCATGGTCC CGCTCGGTCG GCTGAACAAG ACCGTCATGC GGCTCAAGCC GGCGACCGGC AAGGGCTACC TGCGTCCGGC GCAGGTGCAG GAGTACCAGA ACCGGCTCAA GGCCGTCGGG CCGAACATGC CGATCCCGAA GGGCCCGATG CCGCGCAACG GCAAGATGCC TCGGGGTCAG GTGCGTTAA
|
Protein sequence | MARDTTTKTP AGGDAPKKKG RLTQIREVYG MTRKEDPKLP LVLAAWALGA LVVFVALGVL LGSPLFYGIF GIPVAVLAAM IVFGRRAQRA AYSSIKDQAG AAASVLDTLR RGWDVTPGVR FNRQQDMIHR VLGRPGIILV GEGNPNRLKA LFTEERRHLT RLFGPDVPLV AQDIVAGDEE GMVPLGRLNK TVMRLKPATG KGYLRPAQVQ EYQNRLKAVG PNMPIPKGPM PRNGKMPRGQ VR
|
| |