Gene Caci_7408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7408 
Symbol 
ID8338778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8591614 
End bp8592342 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID644960488 
Productintegral membrane protein 
Protein accessionYP_003118075 
Protein GI256396511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG ACACCACGAC GAAGACCCCC GCCGGCGGGG ATGCGCCCAA GAAAAAGGGC 
CGGCTGACGC AGATCCGCGA GGTCTACGGG ATGACCCGCA AGGAGGATCC CAAGCTTCCG
CTGGTTCTGG CCGCTTGGGC CCTGGGCGCC CTGGTGGTGT TCGTGGCGCT GGGCGTCCTG
CTCGGCTCCC CGCTGTTCTA CGGGATCTTC GGCATCCCGG TCGCGGTGCT GGCCGCGATG
ATCGTCTTCG GACGGCGGGC CCAGCGCGCG GCCTACTCCT CCATCAAGGA CCAGGCCGGC
GCGGCCGCCT CGGTGCTGGA CACGCTGCGC CGCGGCTGGG ACGTCACCCC TGGCGTGCGC
TTCAACCGGC AGCAGGACAT GATCCACCGG GTGCTGGGGC GTCCGGGCAT CATCCTGGTC
GGCGAGGGCA ACCCGAACCG GCTCAAGGCG CTGTTCACCG AGGAGCGCCG GCACCTGACC
CGGCTGTTCG GCCCGGACGT GCCGCTGGTC GCCCAGGACA TCGTGGCTGG CGACGAGGAG
GGCATGGTCC CGCTCGGTCG GCTGAACAAG ACCGTCATGC GGCTCAAGCC GGCGACCGGC
AAGGGCTACC TGCGTCCGGC GCAGGTGCAG GAGTACCAGA ACCGGCTCAA GGCCGTCGGG
CCGAACATGC CGATCCCGAA GGGCCCGATG CCGCGCAACG GCAAGATGCC TCGGGGTCAG
GTGCGTTAA
 
Protein sequence
MARDTTTKTP AGGDAPKKKG RLTQIREVYG MTRKEDPKLP LVLAAWALGA LVVFVALGVL 
LGSPLFYGIF GIPVAVLAAM IVFGRRAQRA AYSSIKDQAG AAASVLDTLR RGWDVTPGVR
FNRQQDMIHR VLGRPGIILV GEGNPNRLKA LFTEERRHLT RLFGPDVPLV AQDIVAGDEE
GMVPLGRLNK TVMRLKPATG KGYLRPAQVQ EYQNRLKAVG PNMPIPKGPM PRNGKMPRGQ
VR