| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7314 |
|---|
| Symbol | |
|---|
| ID | 8338683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8495083 |
|---|
| End bp | 8497182 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644960396 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117984 |
|---|
| Protein GI | 256396420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00058158 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000228931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGT TCCAGGGAAT GGCCGCGCAA GCTGTCGTGG AGGCGAACCC TCTCACCGGC
CTCCTTAAGG GAGCTCGGCG ACTCGGCGGC ATCTATCACC TCGACTACGA GCGAGCCGTC
ATCATCACCG ATGATCTCTT GAAGCGAGAC GCTGGCGGCG TGCCGCGTCA CGGCTTCCTC
TTGGCGGCGG CGACCGCTCC GAATCGTGAG CACGATGAGC CGCTTGATGA GGACGAGATC
ATCCTCCTCC GTGTTCGCGG TGTTGCGCAG CTCCCCAACC AGTCCGAAGT GGTGGCCACC
CGAATGGCCG CGATGCGCGA CGCGGACCTC CGCGACCGAA AGCCTTCAGA GATCCTGGAT
ACCCTCACGG AGGGTCAGAT CCAGATGTCG GCCTTTGAGT GCGACGTATT GGGCACGTTT
TACCCCGAGT CCGTAGCTGG CCAAGCGTTC ATCCAATACG GCGCCGACAT CGACAACGTC
TACGCCGGTG CCCGCTACTT CGTCTACACG CCGTCGGCTG AGACTCTGAA GTTCCTCGCC
TCGTATCCGC AGCGGACGAA GGACGAGATA GAGCGCCAAA TTGCTCCGGC GCTGATTGAG
CTTGGGCATG TGCGGTTCGC TGCTACACGC AGACGGGCTG TGGCCGCGGG GTTGGCGGCC
GTGCCAGTCA ACGTGCGCGT GACGGACTTC ATCGCGCGCA AGACCGCCGT CCTGGGCATG
ACCCGCGCGG GTAAGTCGAA CACCAACAAG ACGATCTGCA CCGCTATCTT CGAGTACTCG
CAGACGACGA AGCGGCCGAT CGGTCAGCTG ATCTTCGACC CGCAGGGCGA ATACGCCTCG
GTGAACCAGC AGGACAAGAC TGGCCTCCGG CTACTCGGTG AGGACTGGGT GCGGATCTAT
AAGTTGCGTG CCAACCCGGA TGACCAGCAG GAACGCTCGC TGACGATCAA CTTCTATGAC
CAGTCGCACC TGCCAGCGGT ACGCGGTCTC ATTGAGGAGT GCATCGGGGA TCTCGAAGCA
GGGTATGTGC ACGCGTTCAA GGCCGCCGAA ATCGAAAACC CTGACGCGGA AGACTACCCG
GGTGGGGATA AGGACAGCGC CTACCTCGGC GCAAGTAACC GGGCCCGATG CGGACGCTTC
GCTTTGTACG CGCTCCTAGC CAAGGCTGGC TTCAAGGTAC CGAGCGGCTG GAGCGGCATT
CGATTTCAGA TGGCTGGCGT GGTCGCTGAC GCCATCTTGA AGGACTACGG CTCGTCAACG
CTGATTAAGG AAAGCGGTTA CGTGACAGTC AAGACCATGG ACGGGCTCAA GAGCACCATG
GATTGGCTGT GCCGTCACAT CCAGGCAGCC GAGAAAGCCA CCGACCGGAA ACCGTACTCC
GGCCCTGACA TCACCAAGTG GCGGGAGTGC GTGCCATTCA TGGCCATACG TGCGGCCTAT
GACGGTAGCG GGGGTGGGAC GGCCATTCTC AACCGGTTGA AGGGCAGTAC TGATTTTCAC
GACCCGAAGG CCGATGCCAA CCTACTCCCG CAGGTCGCGA GCGACCTGGA GCGCGGCATG
CTTGTCATCG TTGACTTGTC GTATGGATCG GAACGGGTCG CGACGATGCT GTCCGAACGG
CTAGTCCGTG GCCTCCTGGA CTTGGCGAAC AAGCGGTTCC GAAGTAACCA GGACCCAATG
CGGATGCAGA TCGTCGTCGA AGAAGCCCAC CGACTGTTCG ACCGGGAGAG GGCCAACAAG
AACGAAACGG ACCCGTGGGT GCGCCTGGCC AAGGAGTCTG CGAAGTACGA GATCGGAGTC
ATCTACGCGA CGCAAGAGGT CTCCTCGGTC GACCGCCGGA TCCTGTCGAA CACTCACAAT
TGGGTCATTG CCCACCTGAA CTCTGACCAG GAGACTCGCG AGCTCGCGCA CTACTACGAT
TTTGCCGTGT TTGCCGACGA GATCCGGCGG TCTGAGGAAC CAGGCTTCGC CCGCATGAAG
ACGTTCTCCG GCAAGTACAT CGTGCCGATC CAGATCGCCA AGTTCGACCA CGACATGATC
AATGGCGCGC GCAAGGCCTC GGGGCAGGCA GAGATCACGG TTCCTGGACA GGTCCGCTGA
|
|---|
| Protein sequence | MASFQGMAAQ AVVEANPLTG LLKGARRLGG IYHLDYERAV IITDDLLKRD AGGVPRHGFL
LAAATAPNRE HDEPLDEDEI ILLRVRGVAQ LPNQSEVVAT RMAAMRDADL RDRKPSEILD
TLTEGQIQMS AFECDVLGTF YPESVAGQAF IQYGADIDNV YAGARYFVYT PSAETLKFLA
SYPQRTKDEI ERQIAPALIE LGHVRFAATR RRAVAAGLAA VPVNVRVTDF IARKTAVLGM
TRAGKSNTNK TICTAIFEYS QTTKRPIGQL IFDPQGEYAS VNQQDKTGLR LLGEDWVRIY
KLRANPDDQQ ERSLTINFYD QSHLPAVRGL IEECIGDLEA GYVHAFKAAE IENPDAEDYP
GGDKDSAYLG ASNRARCGRF ALYALLAKAG FKVPSGWSGI RFQMAGVVAD AILKDYGSST
LIKESGYVTV KTMDGLKSTM DWLCRHIQAA EKATDRKPYS GPDITKWREC VPFMAIRAAY
DGSGGGTAIL NRLKGSTDFH DPKADANLLP QVASDLERGM LVIVDLSYGS ERVATMLSER
LVRGLLDLAN KRFRSNQDPM RMQIVVEEAH RLFDRERANK NETDPWVRLA KESAKYEIGV
IYATQEVSSV DRRILSNTHN WVIAHLNSDQ ETRELAHYYD FAVFADEIRR SEEPGFARMK
TFSGKYIVPI QIAKFDHDMI NGARKASGQA EITVPGQVR
|
|---|
| |