Gene Caci_7157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7157 
Symbol 
ID8338525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8330260 
End bp8331000 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID644960238 
Producthypothetical protein 
Protein accessionYP_003117827 
Protein GI256396263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.954255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCC TGATTCGCGT CGAACTGCTC AAACTGCGCA CCGTCCGCAG CCCGTGGCTA 
CTGCTCGCCG CCTCCCCACT CCTGGTGGCC GCCGGGATCG GCGGCGCGAT CACCTCCGGC
TCGGACCCAC ACGACCCGAC CATGCAAGCG CAAGTCATGA CGCACGTCGG TTTGGCTTCC
CTGTTCACCT TGATGTTCGG GATCCTCGCG GTCGCCGGCG AGCACCGGCA CAAGACGATC
ACTGACACAT ACCTGAGCGT CCCCTTCCGC GGCCGCGTCG TCACCGCGAA GCTCGTCGTC
AGTACCGGTG TGGGCGCGGT GAGCGGCCTG GTGAGCACGG TCGTCGGCCT CGTCGTCGCG
GCGGCCCTGT GGTCCGGCAA GGGCGTGTCG TTCTCCTGGG GCGACTCGTC GATGTGGACG
ACGATCGGTG GCGGCATCGC GTGGAACGCC GCGTTCGCCG CGATCGGCGT GGGCATCGGA
GCTCTCGTCC GCAGCCAAGT CGGCGCGATC GCCGCTGCTC TGGCGTGGGT CGCCCTCGTC
GAGGGAGTCG TCGGCCAACT CGTCGGCGGC TTCGCGCGCT GGCTGCCGTT CAGCGCCGGG
CAGGCTCTCG GCGCCGCTGC CAAGCCGATG ATGTCGCACG ACCTGTTGCC CCGATGGGGC
GGCGGCACGG TACTGGCGGT CTACACGGTG CTGTTCGCCG TGCTCGCCGT CACCACGAGC
GTGCGCCGCG ATGTGGCCTA A
 
Protein sequence
MNTLIRVELL KLRTVRSPWL LLAASPLLVA AGIGGAITSG SDPHDPTMQA QVMTHVGLAS 
LFTLMFGILA VAGEHRHKTI TDTYLSVPFR GRVVTAKLVV STGVGAVSGL VSTVVGLVVA
AALWSGKGVS FSWGDSSMWT TIGGGIAWNA AFAAIGVGIG ALVRSQVGAI AAALAWVALV
EGVVGQLVGG FARWLPFSAG QALGAAAKPM MSHDLLPRWG GGTVLAVYTV LFAVLAVTTS
VRRDVA