Gene Caci_7125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7125 
Symbol 
ID8338492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8287392 
End bp8287910 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content73% 
IMG OID644960206 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003117796 
Protein GI256396232 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.817488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG GTGCGGGCGA CGCCGGTCGG GAAAACGGCG CGGGCGGACG CGAGAACCGG 
GGCGGTCACA GCGGTTCGGG CGACACTGAG AACGCGCGCA GTGGCCCAGC CGACCAACCC
GGCTTCCTCC TGTGGCGCGT CACCCTCCGC TGGCAGCGCG AGATCGCCGC GGTCCTCGCG
CCGCTGGACC TCACCCACGT CCAGTTCGTC CTGCTCGCCT GCACCTTCTG GCTCAACGAC
CAGGGCCTCG CGCCGAACCA GGCGACCGTC GCCGAGCAGG CCGGCACCGA CGTGAAGATG
ACCTCGCAGG TGATCCGCAC CCTGGAGACC AAGGGCCTGA TCACCCGCGA GGTCGACCCC
GCCGACACCC GCGCGCGCCG TCTCCGGGTG ACGAGGACCG GCGCCGAGCT CGCCCCGCGC
GCCATGGCCG CAGTGGAGGC CGCCGACGCG GCGTTCTTCG ATCCCGTCGC CCGCCCCGAC
GCCGTCGGCA TGCTCAGCAA GCTCGCGCGC TTCGCGTAG
 
Protein sequence
MSGGAGDAGR ENGAGGRENR GGHSGSGDTE NARSGPADQP GFLLWRVTLR WQREIAAVLA 
PLDLTHVQFV LLACTFWLND QGLAPNQATV AEQAGTDVKM TSQVIRTLET KGLITREVDP
ADTRARRLRV TRTGAELAPR AMAAVEAADA AFFDPVARPD AVGMLSKLAR FA