| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7110 |
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| Symbol | dnaE |
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| ID | 8338477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8271319 |
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| End bp | 8274888 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960191 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_003117781 |
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| Protein GI | 256396217 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.10411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGATT CCTTCGTCCA CCTGCACGTT CACACCGAGT ATTCGATGCT CGACGGTGCG
GCACGACTGA AGGACATGTT CAAGCATGCC TCCTCGTTGG GCATGCCGGC GGTGGCGATG
ACCGACCACG GGAACATGCA CGGCGCGGCC GACTTCACCA AGCAGGCGAT GGCCGCGGGC
ATCAAGCCGA TCCTCGGCAT CGAGGCCTAC GTGGCGCCGG AATCGCGCTA CAACGCCAAG
CCGGTCCGCT GGGGTCAGCC GCACCAAAAA TCCGACGACG TCTCCGGTGG CGGACTCTAC
GGGCACGCCA CCATCTGGGC CCAGAACGTC ACCGGTCTGC AGAACCTCAC CAAGCTCTCC
TCCCGCGCCT TCACCGAGGG CTTCGCGCGC AAGTACCCGC GCATGGACGC CGAGCTCATG
GCGGAGCACT CCGCCGGTCT GATGGCCACC ACCGGCTGCC CCTCGGGCTT CGTGCAGACC
CGGCTGCGCC TGGGGCACTT CGACGAGGCG CTGGCCGCCG CCGGGCAGTA CCAGGAGATC
TTCGGCAAGG AGAACTTCTA CCTGGAGCTG ATGGACCACG GTCTGGACAT CGAGACCCGG
GTCCGCGAAG GGCTGCTGGA CATCGGGCGC AAGCTCAACA TCCCGCCGGT GGTCACCAAC
GACTCGCACT ACACCTACCG CGAAGAGTCC GCCGCGCACG ACGCGCTGCT GTGCATCCAG
ACCGCCTCGA ACATCGCCGA CCCCGACCGC TTCCGGTTCG GCGGCGACGG CTACTACCTG
AAGAGCGCCG ACGAGATGCG GGCGATCAAC ACCGACGACA TCTGGCAGGA GGGCTGCCGG
AACACTCTGG CGATCGCGGA GAAGGTGAAC CCGGAGGGGA TGTTCGCCTA CCGGAACCTC
ATGCCGCGGC TGGAGGCGCC GGACGGGCTG ACCGAGGACC AGTGGTTCCG CAAGCTCGCC
TACGACGGCC TGAACAAGCG GTTCCCGGCC GGCGTCCCGG ACGAGAAGGT CTACCACGCC
CGCCTGGAGT TCGAGCTCGA CGTCATCTTG TCGATGGGCT TCCCCTCCTA CTTCATCGTG
GTCGCGGACT TCATCAACTG GGCCAAGGAC AACGGCATCG CCGTGGGTCC GGGCCGCGGT
TCGGCCGCGG GGTCGCTGGT CGCCTGGTCC CTGGGCATCA CCGACGTCGA CCCGATCCCG
TTCGACCTGC TCTTCGAGCG GTTCCTGAAC CCCGACCGCG TCACCCCGCC CGACATCGAC
ATCGACTTCG ACGACCGCCG CCGCTCGGAC GTGATCCGGT ACGTCACCGA GAAGTACGGC
GAGGACAAGG TCGCGATGAT CGCCACCTTC GGCCGGATCA AGGCCAAGGC GGCGATCAAG
GACTCCAGCC GGATCCTGGG CTACCCGTTC GCGATGGGCG ACCGCATCAC CAAGGCGATG
CCGCCGGACG TGATGGGCAA GTCGATGCCG CTGTCCGGGG TGTTCGACAG CAACCACCCG
CGCTACGGCG AGGCCGGCGA GATCCGCGGG ATGTACGAGC AGGACGCGGA CGTCAAGAAG
GTCATCGACA CCGGCCGCGG CGTGGAGGGC CTGATCCGCC AGCCCGGCGT GCACGCCGCC
GGCGTCATCA TCTCCCCGGA GACGATCACC GACCACGTGC CGGTCATGAT GCGCCCCGCC
GACGGCGTCA TCATCACGCA GTTCGACTAT CCGACCTGCG AGGAAATCGG CCTGATCAAG
ATGGACTTCC TGGGTCTCAG GAACCTGACG ATCATCACCG ACGCGCTGAA CAACGTGGAG
ACCACCACCG GCAAGCGGCT CAACACGCTG GAGTTCCCGC TCGACGACCC GCTGACCTAC
GAGCTGCTGT GCAAGGGCGA CACCCTCGGG GTGTTCCAGC TCGACGGCGG GCCGCTGCGC
TCGCTGCTGC GGCAGATGCG CCCGGACAAC TTCGAAGACG TCTCGGCCAT CATCGCCCTG
TACCGCCCCG GGCCCATGGG CGCGAACTCG CACATCAACT ACGCCGAGCG CAAGAACAAC
CGGCAGCCGA TCACGCCGAT CCACCCGGAG CTGGAGGCGC CGCTGAAGGA AGTCCTCGGC
GTCAGCTACG GCCTGATCAT CTACCAGGAG CAGGTGATGG CGGCCGCGCG AGTGCTCGCC
GGCTACTCCC TGGCCCAAGC GGACCTGCTG CGCCGGGCGA TGGGCAAGAA GAAGAAGGAA
GTCCTCGACA AGGAGTACGT GGGCTTCGAG AAGGGCATGG CCGACAACGG GTATTCGGCC
CAGGCCACCA AGGCGGTCTG GGACGTCCTG GTCCCGTTCG CCGACTACGC GTTCAACAAG
TCGCACTCGG TCGCCTACGG CTTCATCGCC TACCAGACCG CGTATCTCAA GGCGCACTAT
CCGGCCGAGT ACATGGCCGC GCTGCTCACC TCGACGGCGA CCGACAAGGA CCGCTCGGCG
ATCTACCTGG GCGAGTGCCG CCGCATGGGC ATCAAGGTGC TGCCCCCCGA CGTCAACGAC
TCGCTGCACC AGTTCACCCC GGTCGGCACC GACATCCGCT TCGGGCTCGG CGCGATCCGC
AACGTCGGGG AGAACGTGGT CACCTCGATC ATCGCCACCC GCAAGGCCAA GGGCCGGTTC
ACCTCCTTCA ACGACTTCCT GGCCAAGGTG GACCTGCCGG TCTGCAACAA GCGGACCATC
GAATCGCTGA TCAAGGCCGG CGCCTTCGAC TCCCTGGGAC ACTCCCGCCG CGGGCTGATC
GAGCAGCACG AGCGCGCGAT CGACTCGGTG GTGGACGTCA AGAAGCAGGA GGCGCTGGGC
CAGGACTCGC TGTTCGGCTC GCTGATGGAC GGCGGGCAGG AGGCCATCAC CGGCGGGATC
GAGCTGGCCT TCTCCGACAT CGAGTGGGAC AAGAAGGTGC TGCTGGGCTT CGAGCGGGAG
ATGCTGGGGC TCTACGTCTC GGACCATCCG CTCTCCGGCG TGGAGAACCT GCTGGCGTCC
AAGGCGGACT GCTCGATCGC CTCGCTCACC GGGGAGAACG ACCGCGCGGA CGGCTCGATC
GTGACCATCG CCGGGCTGGT CGCCGGGCTC GCCCGCAAGG TCACCAAGCA GGGCAACACC
TGGGCCGCGG CGTCCGTCGA GGACCTCGAG GGCGGCATCG AGACGATGTT CTTCCCGCAG
ACCTACCAGC TGTACTCCAC GCAGCTGGCC GAGGACGCGG TGGTCGTGGT GAAGGGCCGG
CTGGACAAGC GCGACGAGGT GCCCAAGCTG ATCGCGATGG AGGTCGCGGT CCTGGACATC
TCGACCGCCG GCAGCAGCGC TCCGGTGGTG CTGCACGTCT CCGAGTCCCG GGTGATCCCG
GCGACCGTGG AGCGGCTCAA GCGGATCCTC ACCCGCCATC CGGGCACCAC CCCGGTGCGC
ATGCACCTCA AGAGCCGGGA TGAGAAGGTG ATCCGGTACC AGCTCGGCGA CAACCTGCGG
GTGGCCAACT CCCCGGCGCT GAGCTCCGAT CTCAAGGTGC TGCTGGGCGC TGGCTGCTTC
GGCGCCGACC CCTCGCAGGC GGCGGAGTGA
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| Protein sequence | MSDSFVHLHV HTEYSMLDGA ARLKDMFKHA SSLGMPAVAM TDHGNMHGAA DFTKQAMAAG
IKPILGIEAY VAPESRYNAK PVRWGQPHQK SDDVSGGGLY GHATIWAQNV TGLQNLTKLS
SRAFTEGFAR KYPRMDAELM AEHSAGLMAT TGCPSGFVQT RLRLGHFDEA LAAAGQYQEI
FGKENFYLEL MDHGLDIETR VREGLLDIGR KLNIPPVVTN DSHYTYREES AAHDALLCIQ
TASNIADPDR FRFGGDGYYL KSADEMRAIN TDDIWQEGCR NTLAIAEKVN PEGMFAYRNL
MPRLEAPDGL TEDQWFRKLA YDGLNKRFPA GVPDEKVYHA RLEFELDVIL SMGFPSYFIV
VADFINWAKD NGIAVGPGRG SAAGSLVAWS LGITDVDPIP FDLLFERFLN PDRVTPPDID
IDFDDRRRSD VIRYVTEKYG EDKVAMIATF GRIKAKAAIK DSSRILGYPF AMGDRITKAM
PPDVMGKSMP LSGVFDSNHP RYGEAGEIRG MYEQDADVKK VIDTGRGVEG LIRQPGVHAA
GVIISPETIT DHVPVMMRPA DGVIITQFDY PTCEEIGLIK MDFLGLRNLT IITDALNNVE
TTTGKRLNTL EFPLDDPLTY ELLCKGDTLG VFQLDGGPLR SLLRQMRPDN FEDVSAIIAL
YRPGPMGANS HINYAERKNN RQPITPIHPE LEAPLKEVLG VSYGLIIYQE QVMAAARVLA
GYSLAQADLL RRAMGKKKKE VLDKEYVGFE KGMADNGYSA QATKAVWDVL VPFADYAFNK
SHSVAYGFIA YQTAYLKAHY PAEYMAALLT STATDKDRSA IYLGECRRMG IKVLPPDVND
SLHQFTPVGT DIRFGLGAIR NVGENVVTSI IATRKAKGRF TSFNDFLAKV DLPVCNKRTI
ESLIKAGAFD SLGHSRRGLI EQHERAIDSV VDVKKQEALG QDSLFGSLMD GGQEAITGGI
ELAFSDIEWD KKVLLGFERE MLGLYVSDHP LSGVENLLAS KADCSIASLT GENDRADGSI
VTIAGLVAGL ARKVTKQGNT WAAASVEDLE GGIETMFFPQ TYQLYSTQLA EDAVVVVKGR
LDKRDEVPKL IAMEVAVLDI STAGSSAPVV LHVSESRVIP ATVERLKRIL TRHPGTTPVR
MHLKSRDEKV IRYQLGDNLR VANSPALSSD LKVLLGAGCF GADPSQAAE
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