Gene Caci_7045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7045 
Symbol 
ID8338411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8188628 
End bp8189755 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID644960125 
ProductGTP-binding protein Era 
Protein accessionYP_003117716 
Protein GI256396152 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCCA TGACGAGCAG CGCGAGTGGA CGATCCCGGT CCCGCCAGGC GGCGAACGCC 
GAGGCGGCGA AGAAGAAGGC CGAGCGCGTC AAGCGCAGCC AGCAGCTCGC CGAGAAGCGC
GTCACCTCCG ACCGGGTCCG TGACACCGAG CCGGCGCCGA CCGCCTACGG CCGCGGGGTC
CGGGACGACT CGCCGCCGCG CGATGAGTTC CCCGAGGACT TCCGCGCCGG GTTCGCGTGC
TTCGTGGGGC GTCCCAACGC GGGCAAGTCG ACGCTGACCA ACTCGGTCGT GGGCGCGAAG
GTGGCGATCA CCTCCGGGCG GCCGCAGACC ACCCGGCACA CCGTGCGCGG CATCGTGCAC
CGCGACGACG CGCAGCTGGT GCTCGTCGAC ACCCCCGGGC TGCACAAGCC GCGCACCCTG
CTCGGCGCGC GCCTGAACGA CGAGGTGCGC GCCACCTGGA ACGAGGTGGA CGTCATCGGG
TTCTGCGTGC CCGCCGACGA GAAGATCGGT CCCGGCGACC GCTTCATCGC CGCCGAGCTC
GCGCAGGTCC GCCGGACCCC GAAGATCGCC ATCCTGACCA AGACCGACAA GGCCGCCAAG
GAGTTCATCG CCGAGCAGCT GCTGGCCCTG ATGGAGCTGG GCCGCGAGGT CGGCATCGAG
TGGGCCGAGG TGATCCCGGT CTCCGCCGTC CGCGACGAGC AGATCCAGCT GTTGGAGGAC
CTGCTGGTGA AGCAGCTCCC GCAGTCCCCG CCGCTGTACC CGGGCGGGGA GCTGACCGAC
GAGCCGGAAG AGATCATGGT CGGCGAGCTG GTCCGCGAGG CCGCGCTGGA AGGCGTGCGC
GACGAGCTGC CGCACTCCCT GGCCGTCACC GTCGAGGAGA TGACGCTGCG CGAGGGCCGC
CCCGCCGACC GTCCGCTGCT GGACGTGCAC GCGACCCTGT ACGTCGAGCG CCCGAGCCAG
AAGGCGATCG TCATCGGCCA CCGCGGCGAG CGGCTGCGCG ACGTCGGCTC GCAGGCCCGC
CGGCAGATCG AGGCGCTGCT GGGCACCCCG GTGTTCCTGG ACCTGCACGT GAAGGTCGCC
AAGGACTGGC AGCGCGACCC CAAGCAGCTG GCCAAACTCG GCTTCTGA
 
Protein sequence
MVPMTSSASG RSRSRQAANA EAAKKKAERV KRSQQLAEKR VTSDRVRDTE PAPTAYGRGV 
RDDSPPRDEF PEDFRAGFAC FVGRPNAGKS TLTNSVVGAK VAITSGRPQT TRHTVRGIVH
RDDAQLVLVD TPGLHKPRTL LGARLNDEVR ATWNEVDVIG FCVPADEKIG PGDRFIAAEL
AQVRRTPKIA ILTKTDKAAK EFIAEQLLAL MELGREVGIE WAEVIPVSAV RDEQIQLLED
LLVKQLPQSP PLYPGGELTD EPEEIMVGEL VREAALEGVR DELPHSLAVT VEEMTLREGR
PADRPLLDVH ATLYVERPSQ KAIVIGHRGE RLRDVGSQAR RQIEALLGTP VFLDLHVKVA
KDWQRDPKQL AKLGF