Gene Caci_7008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7008 
Symbol 
ID8338374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8147048 
End bp8147743 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content75% 
IMG OID644960088 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_003117679 
Protein GI256396115 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00263906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGTGA CCGCGGTCCG CCTCTGGCGC GCCGCGCTGG ACCAGGACGG GGATCCGCAC 
CGGTGGCTCA GCCACGACGA ACGAGCGCGC GCCGCCCGCT ATGCGAGCCC TGAGGAAGGG
CGTCGCTTCG CGGTGGCGCG CGCCGTTCTG CGTTCGGTGC TGGGGGAGGC CTGCGGTCTC
GCCCCGGAGG AAGTCGTGCT CGGGACCGAG GACGGCGGTC GGCCGATCAT CGTGCCCTGC
GATGAGCATC CGCCGCCCGA CTTCAATCTG TCCCATTCGG GGCGCTGGGC GCTGATCGCC
GTTGCGCCAC CGGGCTTTCG CGTCGGCGTG GACCTGGAAT GGGACGGTCG GGACGTGGAC
TGCCTGGCGA TGGCCCGCAC GATGTTCCAG CCCGCCGAAT TCCGGCGGCT GGCGGTCCTG
GACGGCGTGG CGCGGCGGCG CGAGTTCTTC CGGCTGTGGA CCGCCAAAGA GGCCTACGTC
AAAGCCGACG GCGCCGGGGT CGCCGGGCTG CGCGCCGTCC TGGTGGACGG CGCGACGGCC
CGGTCCTCGG CGCCCTCGGC GGGCTTCCCG GCGGCGCTGC CCGTCCGCTG GTTCGCCGCC
GCTCCCGGCT ATCCGGCGGC GCTCGTCGTG TCCGGCGGCG GGTCGGGCGG TCCATCCGGC
CCGCTCGTCC CGGCCGACCG GTTCCTCGAG AGCTGA
 
Protein sequence
MAVTAVRLWR AALDQDGDPH RWLSHDERAR AARYASPEEG RRFAVARAVL RSVLGEACGL 
APEEVVLGTE DGGRPIIVPC DEHPPPDFNL SHSGRWALIA VAPPGFRVGV DLEWDGRDVD
CLAMARTMFQ PAEFRRLAVL DGVARRREFF RLWTAKEAYV KADGAGVAGL RAVLVDGATA
RSSAPSAGFP AALPVRWFAA APGYPAALVV SGGGSGGPSG PLVPADRFLE S