| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6959 |
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| Symbol | |
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| ID | 8338325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8043811 |
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| End bp | 8047284 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644960040 |
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| Product | DNA helicase related protein |
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| Protein accession | YP_003117631 |
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| Protein GI | 256396067 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.181684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAGG GCGAGGCGGA CGCTGCGATC GTACGGTTCT GGTGGGCCGT GGAGATGTTC
AGTCCACCGA AGATCGAAGA CGAGCCGTCA TGGGACAACA AGGTCTTTCG GCTCTCGCCG
GGTGAAGTCC CCCCTTGGCA CCCCATGCAT CCCTTGGCCA GACTGAAACT CGAGCGAGAC
AAAGTGTGGC AGCACACTGT TTTCGGCGGG ATCTTCGCGC TCGAACGGCT TCGCGATGTG
GTCGTAGCGG TCTTCGGCAA CGATGCAAAG TACCGGGATG CGCGACTGGA CGGCTCGACA
GCGGTGTTCT CGCTGACTCT CACCCAGTCT GGTCATCTCA TAGAAGACTC GCAGGTTCTG
TCATCCTGCG CCTGGGCGAC CGGGCGCGTG CTGGCCCGGC GACCGTGGCG CGGCAGCTGG
CTCGACAAGA CCGCATGGGC TACGGCGCGT GCCGAGTTCG AAGAGCTGAC GCGGCACCTC
GGCGAGCCAC CAGTTCCCGG TATGCCGGGT GGCTCGGGAG CGGGTCGTGG CGATGACGGC
GGCTTGGGCG GCCGGCTCCG CGGCGCCGCA GCGGACGCGG CGGAAGCCGG GGTCAACGCC
GTAGCGGCGC CGCTCGCCAC TTCAGTTGCC GGACCGCTGT TAGGCGGCGC GGTCGGCAAA
GCCGCGGGTA CCTTCGCGAA GAAGATGGTC GAGCCGGACG CGCCGAACGG TGGCGGCGAT
GGTGGTGACC GTGAGAACCA GTCTGCCGGT GGGAGCTCCG ACGGGCGTCG CCCCGTGCAT
CCGCGAGAGT TGTTCGCGCT GTTCGAAGAA CAAGTCAGCC AGCTCCGAAT CGGTAAGGCC
CTCGATCCGG CGGAAATCTG GGTAGCGTCC AAGCGGGTAC ATGTGAGGTC GGCGGACACC
GCCGACAGCG ACTTTCTCAA CAGTTTTCTG TTCGACGATC TCGAGCGCGT CCAAGATGCC
CTGCTCGCCA AGGACGGCGG CAAGGTTCTA GGCGAGTTCC TGCGCCCCAC GGCACACATA
GATATGCGAT CGCGTGTCGA CGTCCGCACG AGCAGTGGCC ACGTCTTGGC AGAAGTGGCG
CCGAAGCACA CGCCGGTCGG CCGGTGGGTC GGCGGGGCGG ACCGTCCTCT GGCACTGAGC
CAACAGTTCG CCGTGAACCA GATCCTCAGC GCGACGAGAG CCGGCTCCAT TCCTGTGTAC
GCGGTCAACG GACCCCCAGG CACAGGCAAG ACGACCATGT TGCGCGATGT GATCGCTGCC
CTCGTGGTCG AGCGCGCCAT CCGTCTGTCC AAGCTCAAAC GGCCCGCAGA CGCATTCGGC
GGCCCGGCGA GTTCCTGGAG CACGGAAGTC GGCACCCGCA AAGTACGGCC ACTGATTCCA
GAACTGACCG GTTTCGAGAT GGTCGTCGCT TGCACAAGCA ACGGCGCGGC GAAGAACATC
ACCCACGAGT TCCCGGGCCC TGAGGGCATC GACGCGTCTT GGCGGGAGGC AGCACGCGAG
ATCGACTACT TCGCCACCGC CGCCTCGATC GCCCTGGAGA TCGAGGACGC CGAACCTGAC
CGGCGGGCCT GGGCTGCAGT CGCCGGCGCG TTGGGCAAGA TGGAGCTCCG ACGGAACTTC
AGCGAACGCC TTTGGTGGGG CGTGACCGCT AAGGAAGAAG CTGCGGCGAA GCGAGACGCA
GCGGATGGCT ACAAGCGTCG GCCGGACCGC TCCGGAGCAG GCCTCGCCGA CCTGCTCACC
GAACAGACCC GGAACGGCAC GCCTATCGAC TGGCCAGCTG CCGTCAAGAG ATTCACGAAC
GCACTGGTCA AAGTCGAAGC GCTAGAGGCG GCACGACAGG CTGCGGCGGA CGCCGCCGAG
ATCGTCGCGA AGTCCGCAGC GCAGACGACA GCTCTGGAAC AGACGCTTGC TGAGGCCGAC
ACCGCTGTCG CACTGGCCGC TGAGAAAGCC GATACCGCAG CGACCTTGCT ACGCCGCGGT
GAGGAGGTTC TCGCCCAGGG ACAGGTCGCA CGGGCCGAAC ACGCACGCCG CCAGCCGAAT
CTGTGGACGT CGCTGTCGAC GCGCGGCAAA GCCGGGCGGG AGTGGTACCA GAAAGATCAG
CAACTGGCCA CACTTCAGGA GCGAACGTCC GCGTTGTACG AGCAGACGCG TCAGGAGGCT
CTGGCGACAT CTGAACACCT CGAGAGAACC CGCCGCCGCC GCACGGAGAT CGCCGACCGG
TTGGCAGCGA CCGAGAGTCG CGCCTATGAG GCGAAGCGGA TCTGGGACCA AGCGCTCGCA
AACTGGAAGG ACCACGTCCC TTCGCCCGCA GTGTTCGCGG ACGATGCGCT CCGCGAGAAG
TCAGCACCCT GGAATGACCG AGACATCGCC GACGCCAGGA CTCGCCTGTT TCTGGAGGCG
CTGCTCCTGC ACAAACAGTT CTTGCTCGCG ACCTCCGAGA CCATGCGGCG CAATCTACAG
GCCGCCTTCG ACATCATCGG CGGCAGCGCA CCATCTGACG TTAAAGGCGA AACAGCGAAA
GCGGCGTGGC AATCGCTGTT CTTGGCAGTA CCCGTAGTGT CTACGACCTT CGCCTCGACC
GGCCGCTTGT TCTCGCATCT CGGCCGTGAA GACCTGGGTT GGCTGTTCAT CGACGAGGCG
GGGCAGGCCA CTCCAGCCGG CGCGGTCGGC GCCATGTGGC GGGCCCAGCA CGCGGTGATC
GTTGGCGACC CTCGGCAACT CGAACCGGTC ATCACCGTTC CGCACAGCCT TCAGCAGGCA
CTGCGCGAGC ACTTCGACGT GGGAGAGGAA TGGCTGCCAG GCCAGGTCTC GGTCCAGACT
CTCGCGGATC GCCTCGCGCC CTACGGTACG TACCTAGACG TCGATGACCA GGACGGACAG
GGCGACCAGG TCTGGGTCGG GGCACCACTG CGTGTCCACC GCCGCTGCGA CGCGCCGATG
TTCGACATCA GCAACGACAT CGCCTACGGC GGCACGCTCA TGGTCAACGG CAAGAAGCCG
ATCGAGCCCG ATGAGGACCC CTACCGGGAC CTGCGCGCGA GCAGCTGGAT CCATGTCGCT
GGCCCATCGA ACGGGGACAG CCCGTGGATC CCCGCGGAGG GCCGCGCTGT GCGGGCACTC
ATCGCGGAGC TGCGCCGAAA CGGCGTCCGG CGCGACCGTA TCCGAGTCAT CAGCCCATTC
CGCAAGGTCG TACGCGGCGT AGCGGAACTG TCGCTAGGAC TTCCCAGGGA AGCGGTCGGA
ACGATCCACA CCATGCAAGG CAAGGAAGCC GACATCGTCA TCCTCGTCCT AGGCAGCAGC
AACGGCGGCC AACGGGTCTG GGCCGCCGAA AAGCCGAATC TGCTGAACGT CGCAGTTTCT
CGCGCAAAGC GTCGGCTGTA CGTCGTCGGG AACCGTGACC TCTGGAAGCA GCAGCAGTAC
TTCAATCAGC TCGCGACCCG GCTTCCGGTG GTCCGCAGCG AGGCCGACGG ATGA
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| Protein sequence | MAKGEADAAI VRFWWAVEMF SPPKIEDEPS WDNKVFRLSP GEVPPWHPMH PLARLKLERD
KVWQHTVFGG IFALERLRDV VVAVFGNDAK YRDARLDGST AVFSLTLTQS GHLIEDSQVL
SSCAWATGRV LARRPWRGSW LDKTAWATAR AEFEELTRHL GEPPVPGMPG GSGAGRGDDG
GLGGRLRGAA ADAAEAGVNA VAAPLATSVA GPLLGGAVGK AAGTFAKKMV EPDAPNGGGD
GGDRENQSAG GSSDGRRPVH PRELFALFEE QVSQLRIGKA LDPAEIWVAS KRVHVRSADT
ADSDFLNSFL FDDLERVQDA LLAKDGGKVL GEFLRPTAHI DMRSRVDVRT SSGHVLAEVA
PKHTPVGRWV GGADRPLALS QQFAVNQILS ATRAGSIPVY AVNGPPGTGK TTMLRDVIAA
LVVERAIRLS KLKRPADAFG GPASSWSTEV GTRKVRPLIP ELTGFEMVVA CTSNGAAKNI
THEFPGPEGI DASWREAARE IDYFATAASI ALEIEDAEPD RRAWAAVAGA LGKMELRRNF
SERLWWGVTA KEEAAAKRDA ADGYKRRPDR SGAGLADLLT EQTRNGTPID WPAAVKRFTN
ALVKVEALEA ARQAAADAAE IVAKSAAQTT ALEQTLAEAD TAVALAAEKA DTAATLLRRG
EEVLAQGQVA RAEHARRQPN LWTSLSTRGK AGREWYQKDQ QLATLQERTS ALYEQTRQEA
LATSEHLERT RRRRTEIADR LAATESRAYE AKRIWDQALA NWKDHVPSPA VFADDALREK
SAPWNDRDIA DARTRLFLEA LLLHKQFLLA TSETMRRNLQ AAFDIIGGSA PSDVKGETAK
AAWQSLFLAV PVVSTTFAST GRLFSHLGRE DLGWLFIDEA GQATPAGAVG AMWRAQHAVI
VGDPRQLEPV ITVPHSLQQA LREHFDVGEE WLPGQVSVQT LADRLAPYGT YLDVDDQDGQ
GDQVWVGAPL RVHRRCDAPM FDISNDIAYG GTLMVNGKKP IEPDEDPYRD LRASSWIHVA
GPSNGDSPWI PAEGRAVRAL IAELRRNGVR RDRIRVISPF RKVVRGVAEL SLGLPREAVG
TIHTMQGKEA DIVILVLGSS NGGQRVWAAE KPNLLNVAVS RAKRRLYVVG NRDLWKQQQY
FNQLATRLPV VRSEADG
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