Gene Caci_6936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6936 
Symbol 
ID8338302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8008294 
End bp8008752 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID644960019 
Producthypothetical protein 
Protein accessionYP_003117610 
Protein GI256396046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000114153 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0165191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA CCCTCAAAGC CGCCATCGGC GCACTCGCCG CTGTCGCGAT GATCGCCCTC 
ACCGCTGTGC CAGCGTCCGC CGCCTCGGCC TCGCGCGCAA AGGACAGCGA CGCGGCGTAC
TTCGTCATGA CTGACGTCAC CCACGAGCAG TTTGTCGTGA GGCTGGACGA TCCCACCGAG
ATCGAGCACG CACGGGACCT GCTGTCAGGC AGAACAACGG ACCGGCCGCA CGTTATCGGA
CGCATCACGT CCCGCACGGC GCCATACAAC CCTCGTTGGA GCTACCACCT CACGCCGAGC
ACCGTCCACT TCTTCGACTT CGCCATCGAG GTCTGCGACG CCACGATCCC CTATGTCGAG
GAACACCTCG ACGAAGCCGG CGGAGCTTTC CTTCCCGGAT ACGTCTGGTG CGACTGGTCT
TCGCGCCTGG TCAAGGAAAT CTCGGCGGTG CAGCCGTAA
 
Protein sequence
MQRTLKAAIG ALAAVAMIAL TAVPASAASA SRAKDSDAAY FVMTDVTHEQ FVVRLDDPTE 
IEHARDLLSG RTTDRPHVIG RITSRTAPYN PRWSYHLTPS TVHFFDFAIE VCDATIPYVE
EHLDEAGGAF LPGYVWCDWS SRLVKEISAV QP