Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6930 |
Symbol | |
ID | 8338296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8003497 |
End bp | 8003979 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644960013 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003117604 |
Protein GI | 256396040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00370305 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00191529 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACGACC CAGTGGACAT CTCAGCGCTG CAGCGGCTCG TACAGCGCCA TCGTGCTGAG CGCGGACTGA GTCTCCGCGC AGCGGCCGAA GAATCCGAAG TGCCTTTCAA CACGCTCGCC CGCGTCGAGA AGGGACACTT GCCCGACCTC GCCAACTTCC GACGCATCGT CGAGTGGTTG GGCCTGCCCC CGGAGCGGTT CTTCGAGCCG CCGCGCGTAC GTACCGAGAG CACTCCGGAG CTCATCGCTT ACCACCTCGC GCGCGACCCG AATCTCTCCG ACGCCGCCGC GGGACGGATC GCGGCCCTTG TGCGCGACCT TTACGACACC ATGGCCGAGC CGGCTGGCGC CGTCCAGGTT CACCTGCGAG CGGCCAGTAC CTTCACCCCG CAGGCCGCTC GCGCGCTGGG CGAGCTGCTG GAAACCATCC AAGCCAAACT CGAGTCACGC TCTGGCGGCG CCCCTTCGGC CGAGGACAGG TAG
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Protein sequence | MDDPVDISAL QRLVQRHRAE RGLSLRAAAE ESEVPFNTLA RVEKGHLPDL ANFRRIVEWL GLPPERFFEP PRVRTESTPE LIAYHLARDP NLSDAAAGRI AALVRDLYDT MAEPAGAVQV HLRAASTFTP QAARALGELL ETIQAKLESR SGGAPSAEDR
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