Gene Caci_6930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6930 
Symbol 
ID8338296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8003497 
End bp8003979 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID644960013 
Producthelix-turn-helix domain protein 
Protein accessionYP_003117604 
Protein GI256396040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00370305 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00191529 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACGACC CAGTGGACAT CTCAGCGCTG CAGCGGCTCG TACAGCGCCA TCGTGCTGAG 
CGCGGACTGA GTCTCCGCGC AGCGGCCGAA GAATCCGAAG TGCCTTTCAA CACGCTCGCC
CGCGTCGAGA AGGGACACTT GCCCGACCTC GCCAACTTCC GACGCATCGT CGAGTGGTTG
GGCCTGCCCC CGGAGCGGTT CTTCGAGCCG CCGCGCGTAC GTACCGAGAG CACTCCGGAG
CTCATCGCTT ACCACCTCGC GCGCGACCCG AATCTCTCCG ACGCCGCCGC GGGACGGATC
GCGGCCCTTG TGCGCGACCT TTACGACACC ATGGCCGAGC CGGCTGGCGC CGTCCAGGTT
CACCTGCGAG CGGCCAGTAC CTTCACCCCG CAGGCCGCTC GCGCGCTGGG CGAGCTGCTG
GAAACCATCC AAGCCAAACT CGAGTCACGC TCTGGCGGCG CCCCTTCGGC CGAGGACAGG
TAG
 
Protein sequence
MDDPVDISAL QRLVQRHRAE RGLSLRAAAE ESEVPFNTLA RVEKGHLPDL ANFRRIVEWL 
GLPPERFFEP PRVRTESTPE LIAYHLARDP NLSDAAAGRI AALVRDLYDT MAEPAGAVQV
HLRAASTFTP QAARALGELL ETIQAKLESR SGGAPSAEDR