Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6920 |
Symbol | |
ID | 8338286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7994619 |
End bp | 7995389 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644960004 |
Product | hypothetical protein |
Protein accession | YP_003117595 |
Protein GI | 256396031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000215258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000122143 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCGGA TCATCGGAAT CTGCGGCGTC GGCAACGACC CGCGCACCCA TGCGTTCCGC AGCGTGGAGA AGGAATGGAT CGGCGCCCTG CTTCGCGGAA TGAGATGCAC TGGAACGACG GAAGATCCGG TGCTCGATTT CGAGTGCTTG TGTTTCGCGG ACTTGCTAGA TCCGGCTGAT CCGTTCGGCG GTGGCGTCCA ACAGGACTTC ATCTGTCGTT TTGGCGGGCG GCGGGTCAAC AGGACCCGGG ATTTCCTGAC CCACGTGTCC GCCTATCTCG CCGACCAACG TGTCCGGGAG AAGGTCCAGC AACGGATCGC CGACCGCGTC GGGCCCGACA CCCGGGTCTT GATAGGGCAT TCACTCGGAT CGGTGGCAGC CTACGAAACC TTGTGCCGGG CCTCAGCTCA GGGCGTTCAG ACACTGATCA GCCTGGGATC GCCGCTCGGC TTCCACCGTT CGGTCCTGCG CACCCGGACT GCGCCGAACG CGGCGGGTCG CTATCCCTGG CCGGTCGGTC TGCGCCGCTG GGTCAACGTT TATGACTGGA AGGACCCGTT CGCGGCCAAG GTGAGGCTAC GGCCGCTGTT CGGCGACGGC CGTCAGGTAG AGGACTGCCG GGTGTGGAAT TGGGCATGGC CACATGCCGC CACCGCCTAC CTGATGGCTC GGCCCACGGC ACAGGCCGTC ACCGACGCCC TGCTCTCGGC GTCGGACTTT CTGCTCTGTA AAAGTGTGCA AGCAGACGCG GTCGGTGTGC GCCAACCATG A
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Protein sequence | MARIIGICGV GNDPRTHAFR SVEKEWIGAL LRGMRCTGTT EDPVLDFECL CFADLLDPAD PFGGGVQQDF ICRFGGRRVN RTRDFLTHVS AYLADQRVRE KVQQRIADRV GPDTRVLIGH SLGSVAAYET LCRASAQGVQ TLISLGSPLG FHRSVLRTRT APNAAGRYPW PVGLRRWVNV YDWKDPFAAK VRLRPLFGDG RQVEDCRVWN WAWPHAATAY LMARPTAQAV TDALLSASDF LLCKSVQADA VGVRQP
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