Gene Caci_6898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6898 
Symbol 
ID8338264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7966677 
End bp7967255 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content64% 
IMG OID644959986 
Producthypothetical protein 
Protein accessionYP_003117577 
Protein GI256396013 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.119426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.193827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT GTCTGTTGCT GGATAAGGGG TCAGAGGTGC GTGTAGCTGC TAAGAAGGCG 
CTTGTGTCGG CTGCGGCCGT CTGCGCGCTC GTGTCCGGGT GCGCGCACGG CTCGAAGACC
ACGCTGCCGG TAGCACCCTC GTCGTCGGAT CCGTCCAGCG GCTCCCAGGC CTCGACACGG
GCAGCGGTGT TGGCCGGGTA TACGGGCATG TGGAGTGACT ACCAAAAGGA TCTGCTGACC
GCGAACTGGC GGAATCCGGT CTCGGTGAAT CACGCGACAG GTGAGGCGCT CCAGGACCTG
GAAAACTCGC TCGCGGTAGA CGGCCACAAC GGGTGGATCG GGAAGGGCGC ACCTGTTCTG
AACCCTGTGA TCAAGTCCGT GTCTGGTGCT GGTGTGGCTG CCACCGCCGA AGTGGTCGAT
TGCGCCGACC TCTCGCACTT CCTGAAGTAC GTAGCCGCGA CCGGTGCGCT GGAGGATTCA
ACGCCTGGTG GCCGCCATCT CATTGATGCA GGGCTTGTTG TGAAGGGTGG CGTGTGGAAG
GTTTCCACTC TCGCCACCGG CCAGGCGGGA TCGTGCTGA
 
Protein sequence
MASCLLLDKG SEVRVAAKKA LVSAAAVCAL VSGCAHGSKT TLPVAPSSSD PSSGSQASTR 
AAVLAGYTGM WSDYQKDLLT ANWRNPVSVN HATGEALQDL ENSLAVDGHN GWIGKGAPVL
NPVIKSVSGA GVAATAEVVD CADLSHFLKY VAATGALEDS TPGGRHLIDA GLVVKGGVWK
VSTLATGQAG SC