Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6880 |
Symbol | |
ID | 8338246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7950364 |
End bp | 7951128 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644959968 |
Product | Methyltransferase type 12 |
Protein accession | YP_003117559 |
Protein GI | 256395995 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0173101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAGATT CCTGCAAGGT AGAAGCCTTG GAAGAGGCGT CGCTGCTCTA TCGAGAGCCC GCGTTGTATG CCGAGATGGC TGACGCCGAA GCCGTCGACA CCGCGGCTGC CATCGTGGCC TTGGCCGACC GTCACGGCCC GGCTGGTGCT GATTCGCTGC TGGACGTCGG GTGTGGCACC GGCGCGGTAT TGGAGCAGCT CGCTTGCAAG TACTCGAAGT CGGCCGGTGT CGACCTGCTG CCAGGGATGA TCGAGATTTC GAGAGAGCGC CGCCCTCAGT TGGAGACGTA TGTCGGCGAC ATGCGCACGA TACGGCTGGG ACGGTCCTTC GAAGTCGTGA CCTGCATCGG CAACGCCCTG GCGTACCTCA CCGCGCCGGA CGATATTGAG GCGGCGTTCG CGACCTTCGC TGGCCACTGC GTTCCAGGAG GCGTGCTGGT CATTCGAACG CTCACTGCGT TTCCTCCGCT GGACAGGTCC CGGACTTCGC GGACTCGGGT CTCGGGACGG TCCGCGAACG TCACCACTAC GTACACCCGG GATCCGGCGG CCGAAGTGTT GATTTTGACT CGGCATTGGG ACTTCGAGGA CCGAGAACCT GCAACGGACG TTATCCGTCG ACGTGTGCTG ACGATCGGTG AGCAGGAGTC GTTCGCGGCT GCCGCGGGCT TCACCCTCGT CCGTCCGAGA GACGAGGACG AGGACATGAC CATCTTCATC CGCGACGATG CGGGTGACCT GAGGAGCGGA GTCGCCGATG ACTGA
|
Protein sequence | MTDSCKVEAL EEASLLYREP ALYAEMADAE AVDTAAAIVA LADRHGPAGA DSLLDVGCGT GAVLEQLACK YSKSAGVDLL PGMIEISRER RPQLETYVGD MRTIRLGRSF EVVTCIGNAL AYLTAPDDIE AAFATFAGHC VPGGVLVIRT LTAFPPLDRS RTSRTRVSGR SANVTTTYTR DPAAEVLILT RHWDFEDREP ATDVIRRRVL TIGEQESFAA AAGFTLVRPR DEDEDMTIFI RDDAGDLRSG VADD
|
| |