Gene Caci_6880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6880 
Symbol 
ID8338246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7950364 
End bp7951128 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID644959968 
ProductMethyltransferase type 12 
Protein accessionYP_003117559 
Protein GI256395995 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0173101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGATT CCTGCAAGGT AGAAGCCTTG GAAGAGGCGT CGCTGCTCTA TCGAGAGCCC 
GCGTTGTATG CCGAGATGGC TGACGCCGAA GCCGTCGACA CCGCGGCTGC CATCGTGGCC
TTGGCCGACC GTCACGGCCC GGCTGGTGCT GATTCGCTGC TGGACGTCGG GTGTGGCACC
GGCGCGGTAT TGGAGCAGCT CGCTTGCAAG TACTCGAAGT CGGCCGGTGT CGACCTGCTG
CCAGGGATGA TCGAGATTTC GAGAGAGCGC CGCCCTCAGT TGGAGACGTA TGTCGGCGAC
ATGCGCACGA TACGGCTGGG ACGGTCCTTC GAAGTCGTGA CCTGCATCGG CAACGCCCTG
GCGTACCTCA CCGCGCCGGA CGATATTGAG GCGGCGTTCG CGACCTTCGC TGGCCACTGC
GTTCCAGGAG GCGTGCTGGT CATTCGAACG CTCACTGCGT TTCCTCCGCT GGACAGGTCC
CGGACTTCGC GGACTCGGGT CTCGGGACGG TCCGCGAACG TCACCACTAC GTACACCCGG
GATCCGGCGG CCGAAGTGTT GATTTTGACT CGGCATTGGG ACTTCGAGGA CCGAGAACCT
GCAACGGACG TTATCCGTCG ACGTGTGCTG ACGATCGGTG AGCAGGAGTC GTTCGCGGCT
GCCGCGGGCT TCACCCTCGT CCGTCCGAGA GACGAGGACG AGGACATGAC CATCTTCATC
CGCGACGATG CGGGTGACCT GAGGAGCGGA GTCGCCGATG ACTGA
 
Protein sequence
MTDSCKVEAL EEASLLYREP ALYAEMADAE AVDTAAAIVA LADRHGPAGA DSLLDVGCGT 
GAVLEQLACK YSKSAGVDLL PGMIEISRER RPQLETYVGD MRTIRLGRSF EVVTCIGNAL
AYLTAPDDIE AAFATFAGHC VPGGVLVIRT LTAFPPLDRS RTSRTRVSGR SANVTTTYTR
DPAAEVLILT RHWDFEDREP ATDVIRRRVL TIGEQESFAA AAGFTLVRPR DEDEDMTIFI
RDDAGDLRSG VADD